RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ARFGAP2Q8N6H7 521 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM99Q8N816 258 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 OR5AK3PQ8NH89 298 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 MIPOL1Q8TD10 442 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 MZB1Q8WU39 189 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 PRPF18Q99633 342 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 SEC61A2Q9H9S3 476 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 ZMAT3Q9HA38 289 aaKnown RBP8.1□□□□□ -1.11
NEDD9-203ENST00000397378 EXD2Q9NVH0 621 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 OSGIN1Q9UJX0 560 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 WDR45Q9Y484 360 aa8.1□□□□□ -1.11
NEDD9-203ENST00000397378 IGHV2OR16-5A0A0B4J2B6 119 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 A0A0G2JMP0 313 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 A0A0X1KG70 313 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 LOC100653049A0A140TA62 436 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM72A0PK05 275 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 SH3PXD2BA1X283 911 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 AQP7P3A6NL99 342 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 NR5A2O00482 541 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 FAAHO00519 579 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 CFLARO15519 480 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 SYNGR3O43761 229 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 PLIN3O60664 434 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 KRT34O76011 436 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 AGR2O95994 175 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 GPIP06744 558 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 FGF4P08620 206 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ADRA2AP08913 450 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 CBR1P16152 277 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 CCNA2P20248 432 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ACHEP22303 614 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 OMGP23515 440 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 CASQ1P31415 396 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 GPR6P46095 362 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 TMEM33P57088 247 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 KCNJ10P78508 379 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ZP4Q12836 540 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 PTGR1Q14914 329 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 FAM153CQ494X1 144 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ELFN2Q5R3F8 820 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 KANK2Q63ZY3 851 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 TYW3Q6IPR3 259 aaKnown RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 MYPOPQ86VE0 399 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 RIMKLAQ8IXN7 391 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ANKK1Q8NFD2 765 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 IL17RDQ8NFM7 739 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 OR4M2Q8NGB6 313 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 WFDC12Q8WWY7 111 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 SLC25A28Q96A46 364 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 SLC35G5Q96KT7 338 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 PPP3R2Q96LZ3 170 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ALKBH3Q96Q83 286 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 TMPRSS13Q9BYE2 586 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 LINC00470Q9BZP3 86 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 TPK1Q9H3S4 243 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 MS4A5Q9H3V2 200 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 G6PC2Q9NQR9 355 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.09□□□□□ -1.11
NEDD9-203ENST00000397378 FIS1Q9Y3D6 152 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 CMAHPQ9Y471 501 aa8.09□□□□□ -1.11
NEDD9-203ENST00000397378 A0A096LPE4 126 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 A0A1W2PPZ6 126 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 LIPT2A6NK58 231 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RPL36A-HNRNPH2H7BZ11 118 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 M0R233 179 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 AKR7A3O95154 331 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 VAMP5O95183 116 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CELA3BP08861 270 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CPA3P15088 417 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ANPEPP15144 967 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 PRPS1L1P21108 318 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TACR3P29371 465 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 PCGF2P35227 344 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 SOAT1P35610 550 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ARR3P36575 388 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 SELENOPP49908 381 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 P2RY4P51582 365 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 LMO4P61968 165 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TUBA1BP68363 451 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TUBA4AP68366 448 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 MRPS11P82912 194 aaKnown RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 BAMBIQ13145 260 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 SNTB2Q13425 540 aaKnown RBP8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CEACAM7Q14002 265 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 DAG1Q14118 895 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 UGT3A2Q3SY77 523 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ATP6AP1LQ52LC2 224 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ZNF311Q5JNZ3 666 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 ATAD3BQ5T9A4 648 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 REP15Q6BDI9 236 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TMEM225Q6GV28 225 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 FRRS1Q6ZNA5 592 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 CREB3L2Q70SY1 520 aa8.08□□□□□ -1.12
NEDD9-203ENST00000397378 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms