RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MED31Q9Y3C7 131 aa13.53□□□□□ -0.24
CAPN3-207ENST00000397200 TNRC6AQ8NDV7 1962 aaKnown RBP13.52□□□□□ -0.24
CAPN3-207ENST00000397200 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 BHLHE40O14503 412 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 UBL4AP11441 157 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 IFI30P13284 250 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 CD46P15529 392 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 MTNR1AP48039 350 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 CD226Q15762 336 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 CLEC12AQ5QGZ9 265 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 FNDC7Q5VTL7 733 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 GDPGP1Q6ZNW5 385 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 ADCK1Q86TW2 530 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 FANK1Q8TC84 345 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 SAMD8Q96LT4 415 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 C5orf34Q96MH7 638 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 ANGPTL4Q9BY76 406 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 RTN4RQ9BZR6 473 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 MEPEQ9NQ76 525 aaPredicted RBP13.52□□□□□ -0.25
CAPN3-207ENST00000397200 NDUFB11Q9NX14 153 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.25
CAPN3-207ENST00000397200 GPR52Q9Y2T5 361 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 EXOSC1Q9Y3B2 195 aaKnown RBP13.52□□□□□ -0.25
CAPN3-207ENST00000397200 PCDHGB7Q9Y5F8 929 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 WIF1Q9Y5W5 379 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 LOC400499M0QZD8 3231 aa13.52□□□□□ -0.25
CAPN3-207ENST00000397200 ANKRD33BA6NCL7 494 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 MYL12BO14950 172 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF264O43296 627 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 HSMCR30P0CW71 290 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 HTR1FP30939 366 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 PTGDSP41222 190 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 ETV1P50549 477 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 C1DQ13901 141 aaKnown RBP13.51□□□□□ -0.25
CAPN3-207ENST00000397200 LNX2Q8N448 690 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 ZADH2Q8N4Q0 377 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF485Q8NCK3 441 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 BPIFA2Q96DR5 249 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 ARHGAP9Q9BRR9 750 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 CENPOQ9BU64 300 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 MMP27Q9H306 513 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 SIGLEC7Q9Y286 467 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 CARD8Q9Y2G2 431 aa13.51□□□□□ -0.25
CAPN3-207ENST00000397200 C2orf72A6NCS6 295 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 G3V3Y1 287 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 HCRTR2O43614 444 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 RCBTB2O95199 551 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SNX4O95219 450 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 IGHA1P01876 353 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 TNFSF10P50591 281 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CDH11P55287 796 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 C17orf67Q0P5P2 114 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 NDUFAF6Q330K2 333 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SLC25A25Q6KCM7 469 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 PAQR6Q6TCH4 344 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 IGFL3Q6UXB1 125 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 IGFN1Q86VF2 1251 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 TMCO5AQ8N6Q1 288 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 OR52L1Q8NGH7 329 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 DUSP19Q8WTR2 217 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ABHD17AQ96GS6 310 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CHCHD6Q9BRQ6 235 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 PRORYQ9H606 182 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 HINT3Q9NQE9 182 aaKnown RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 KLHL1Q9NR64 748 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SEC14L4Q9UDX3 406 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 J3QRE1 110 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ADAM10O14672 748 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 NME2P1O60361 137 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 EIF4E2O60573 245 aaKnown RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 PTP4A3O75365 173 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 GPX5O75715 221 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SP1P08047 785 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 LIMS3P0CW19 117 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 LIMS4P0CW20 117 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 BMP4P12644 408 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CPEP16870 476 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 MYL12AP19105 171 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CNR1P21554 472 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 NME2P22392 152 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CALRP27797 417 aaKnown RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CCR4P51679 360 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 WNT4P56705 351 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF117Q03924 483 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SKP2Q13309 424 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 FHL1Q13642 323 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 SOWAHCQ53LP3 525 aaPredicted RBP13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ULK3Q6PHR2 472 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 Q6ZNX1 250 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 GID4Q8IVV7 300 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF440Q8IYI8 595 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF649Q9BS31 505 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
CAPN3-207ENST00000397200 HES7Q9BYE0 225 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms