RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 EVX1P49640 407 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 FUT5Q11128 374 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 SNTB2Q13425 540 aaKnown RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 DAG1Q14118 895 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 XKR7Q5GH72 579 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 FAHD2BQ6P2I3 314 aaPredicted RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 CREB3L2Q70SY1 520 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 TRMT10CQ7L0Y3 403 aaKnown RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 CARM1Q86X55 608 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CLECL1Q8IZS7 167 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 IL17RDQ8NFM7 739 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 ROPN1LQ96C74 230 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 ZG16BQ96DA0 208 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 FAHD2AQ96GK7 314 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 GATA5Q9BWX5 397 aaPredicted RBP12.89□□□□□ -0.35
SEC13-206ENST00000397102 LINC00470Q9BZP3 86 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 MS4A5Q9H3V2 200 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 TREM2Q9NZC2 230 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CMAHPQ9Y471 501 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 LOC105371242A0A075B767 164 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 UPK3AO75631 287 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 VAMP5O95183 116 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 COL8A2P25067 703 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 CRHR1P34998 444 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 P2RY4P51582 365 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
SEC13-206ENST00000397102 FOXL1Q12952 345 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 C6orf136Q5SQH8 315 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 IL23RQ5VWK5 629 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 REP15Q6BDI9 236 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 KRT80Q6KB66 452 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 HMGN2P46Q86SG4 172 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 C10orf107Q8IVU9 208 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 RDH5Q92781 318 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 RAB8BQ92930 207 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 MRPL24Q96A35 216 aaKnown RBP12.88□□□□□ -0.35
SEC13-206ENST00000397102 NOX3Q9HBY0 568 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 REV1Q9UBZ9 1251 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 MID2Q9UJV3 735 aa12.88□□□□□ -0.35
SEC13-206ENST00000397102 RPL36A-HNRNPH2H7BZ11 118 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 WNT9BO14905 357 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 SCN2BO60939 215 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 AVPP01185 164 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 HPXP02790 462 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 CHRNGP07510 517 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 UQCRBP14927 111 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 TMEM33P57088 247 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 LMO4P61968 165 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 HPCAP84074 193 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 NPRL3Q12980 569 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
SEC13-206ENST00000397102 TNFAIP8L2Q6P589 184 aaPredicted RBP12.87□□□□□ -0.35
SEC13-206ENST00000397102 C1QL2Q7Z5L3 287 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 ZDHHC22Q8N966 263 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 FNDC5Q8NAU1 212 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 SLC6A7Q99884 636 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 TAPBPLQ9BX59 468 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 MRPL37Q9BZE1 423 aaKnown RBP12.87□□□□□ -0.35
SEC13-206ENST00000397102 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 ESM1Q9NQ30 184 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 SLC52A3Q9NQ40 469 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
SEC13-206ENST00000397102 ADPRHL2Q9NX46 363 aa12.87□□□□□ -0.35
SEC13-206ENST00000397102 ZNF503-AS2A6NEH8 195 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 TMEM229AB2RXF0 380 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 RNASET2O00584 256 aaKnown RBP12.86□□□□□ -0.35
SEC13-206ENST00000397102 TRIM13O60858 407 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 BCL10O95999 233 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 ANPEPP15144 967 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 NR4A1P22736 598 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 CXCR1P25024 350 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 UBA52P62987 128 aaKnown RBP12.86□□□□□ -0.35
SEC13-206ENST00000397102 MRPS11P82912 194 aaKnown RBP12.86□□□□□ -0.35
SEC13-206ENST00000397102 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
SEC13-206ENST00000397102 MYBPC1Q00872 1141 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 EPS8Q12929 822 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 PCLAFQ15004 111 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 GSTA3Q16772 222 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 MSMPQ1L6U9 139 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 PGS1Q32NB8 556 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 GPAT3Q53EU6 434 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 OR4F3Q6IEY1 312 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 TREML4Q6UXN2 200 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
SEC13-206ENST00000397102 LRRC17Q8N6Y2 441 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 OR4A15Q8NGL6 344 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 YIPF5Q969M3 257 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 C3orf30Q96M34 536 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
SEC13-206ENST00000397102 TRRAPQ9Y4A5 3859 aa12.85□□□□□ -0.35
SEC13-206ENST00000397102 PRAMEF27A3QJZ7 478 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms