RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MUS81Q96NY9 551 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ZNF317Q96PQ6 595 aaPredicted RBP12.3□□□□□ -0.44
SEC13-204ENST00000397099 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 SLCO5A1Q9H2Y9 848 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 LOC102725191A0A1B0GVB3 256 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 A0A1B0GWA3 101 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
SEC13-204ENST00000397099 IFNA14P01570 189 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 ZNF43P17038 809 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 MPGP29372 298 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 MTPNP58546 118 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 NKX6-1P78426 367 aaPredicted RBP12.29□□□□□ -0.44
SEC13-204ENST00000397099 BNIP2Q12982 314 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 KLF10Q13118 480 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 VEZF1Q14119 521 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 P3H2Q8IVL5 708 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 DEPDC4Q8N2C3 294 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 C10orf111Q8N326 155 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 SCAIQ8N9R8 606 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 FBXW5Q969U6 566 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 LRRC58Q96CX6 371 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 TMEM43Q9BTV4 400 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 GSX1Q9H4S2 264 aaPredicted RBP12.29□□□□□ -0.44
SEC13-204ENST00000397099 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 SAR1AQ9NR31 198 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 FAIMQ9NVQ4 179 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 RCE1Q9Y256 329 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
SEC13-204ENST00000397099 ZFHX3Q15911 3703 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 A0A087WUJ7 227 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 A0A0B4J2E0 115 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 A0A1B0GX12 115 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 M0QX08 132 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 PDLIM1O00151 329 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 TPST1O60507 370 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 CCDC22O60826 627 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 RAMP1O60894 148 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 KRT33AO76009 404 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 WNT11O96014 354 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 PTAFRP25105 342 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 HTR2AP28223 471 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 AQP1P29972 269 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 RPS5P46782 204 aaKnown RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 P2RY4P51582 365 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 SH3BGRP55822 239 aaPredicted RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 GUCY1A3Q02108 690 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 EGR4Q05215 589 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 GABRA6Q16445 453 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 VMACQ2NL98 169 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 KLHL24Q6TFL4 600 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 H1FNTQ75WM6 255 aaPredicted RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 CCDC80Q76M96 950 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 ARPINQ7Z6K5 226 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 OR10A6Q8NH74 314 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 AKAP1Q92667 903 aaKnown RBP eCLIP12.28□□□□□ -0.44
SEC13-204ENST00000397099 DNAJA3Q96EY1 480 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 OXGR1Q96P68 337 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 ARHGDIGQ99819 225 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 GSX2Q9BZM3 304 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 LINC00470Q9BZP3 86 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 GRIP2Q9C0E4 1043 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 POLR2J3Q9H1A7 115 aaKnown RBP12.28□□□□□ -0.44
SEC13-204ENST00000397099 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 BAG5Q9UL15 447 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 PRR14LQ5THK1 2151 aa12.28□□□□□ -0.44
SEC13-204ENST00000397099 FAM171A2A8MVW0 826 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 FBP2O00757 339 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 MRASO14807 208 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 RAD51DO75771 328 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 MT-ATP6P00846 226 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 HOXC5Q00444 222 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 BSPH1Q075Z2 132 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 DMTNQ08495 405 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 TSC22D1Q15714 1073 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ETFDHQ16134 617 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 NRF1Q16656 503 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ZNF672Q499Z4 452 aaPredicted RBP12.27□□□□□ -0.45
SEC13-204ENST00000397099 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 RP9Q8TA86 221 aaKnown RBP12.27□□□□□ -0.45
SEC13-204ENST00000397099 GTPBP3Q969Y2 492 aaKnown RBP12.27□□□□□ -0.45
SEC13-204ENST00000397099 SLC25A36Q96CQ1 311 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
SEC13-204ENST00000397099 MPP4Q96JB8 637 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 PTDSS2Q9BVG9 487 aa12.27□□□□□ -0.45
SEC13-204ENST00000397099 ASPNQ9BXN1 380 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms