RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ZNF433Q8N7K0 673 aaPredicted RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 OR5M1Q8NGP8 315 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 RASD2Q96D21 266 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 OR2A7Q96R45 310 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 KLHDC3Q9BQ90 382 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 TIMM29Q9BSF4 260 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 CACNA1IQ9P0X4 2223 aa12.76□□□□□ -0.37
NUP98-204ENST00000397004 THAP10Q9P2Z0 257 aaPredicted RBP12.76□□□□□ -0.37
NUP98-204ENST00000397004 A0A1B0GUH1 482 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 CYR61O00622 381 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SUSD5O60279 629 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 GGTLC2Q14390 218 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 CST6Q15828 149 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 EIPR1Q53HC9 387 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 KIRREL2Q6UWL6 708 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 ALKAL2Q6UX46 152 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 COX18Q8N8Q8 333 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 ZNF275Q9NSD4 429 aaPredicted RBP12.75□□□□□ -0.37
NUP98-204ENST00000397004 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 PYCARD-AS1I3L0S3 204 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 AIPO00170 330 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 PRKNO60260 465 aaPredicted RBP12.75□□□□□ -0.37
NUP98-204ENST00000397004 FGF19O95750 216 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 PSG6Q00889 435 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
NUP98-204ENST00000397004 FAM71CQ8NEG0 241 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 OR14A16Q8NHC5 309 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 RADILQ96JH8 1075 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 Q96M85 177 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 KCNK15Q9H427 330 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 hCG_1807616A0A1W2PRN6 198 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 POM121BA6NF01 834 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 H0Y8X5 98 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 GABARAPH6UMI1 98 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 ZNF749O43361 778 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 CBX7O95931 251 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 FCER2P06734 321 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 OR2T7P0C7T2 308 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 CMPK1P30085 196 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 OR2T27Q8NH04 317 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 NT5CQ8TCD5 201 aa12.75□□□□□ -0.37
NUP98-204ENST00000397004 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
NUP98-204ENST00000397004 TMEM272A0A1B0GTI8 110 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 OR2W5A6NFC9 320 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 C1QTNF3-AMACRE9PGA6 284 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 DCTN6O00399 190 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 FMO6PO60774 539 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 PVRP15151 417 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CTRB1P17538 263 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 EPHA4P54764 986 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CDH24Q86UP0 819 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 RAB42Q8N4Z0 105 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 OR51A4Q8NGJ6 313 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 OR6M1Q8NGM8 313 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CTHRC1Q96CG8 243 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ASB16Q96NS5 453 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CD93Q9NPY3 652 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 DUSP22Q9NRW4 184 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF69Q9UC07 566 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 DPP7Q9UHL4 492 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 TRAV8-7A0A075B6U6 113 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 A0A1B0GVT2 93 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 TSPAN4O14817 238 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 HLXQ14774 488 aaPredicted RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF626Q68DY1 528 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 RPL22L1Q6P5R6 122 aaKnown RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF613Q6PF04 617 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF614Q8N883 585 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF511Q8NB15 262 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 OR52H1Q8NGJ2 320 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CNN2Q99439 309 aaKnown RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 NMNAT2Q9BZQ4 307 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ACTR6Q9GZN1 396 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 KRCC1Q9NPI7 259 aaPredicted RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 STARD5Q9NSY2 213 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 FBXL3Q9UKT7 428 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ENTPD2Q9Y5L3 495 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 CACNA1CQ13936 2221 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ZNF879B4DU55 563 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 TGFBR3LH3BV60 316 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 S1PR1P21453 382 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 RPS27P42677 84 aaKnown RBP12.74□□□□□ -0.37
NUP98-204ENST00000397004 ADPRHP54922 357 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ACTC1P68032 377 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ACTA1P68133 377 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 ELFN2Q5R3F8 820 aa12.74□□□□□ -0.37
NUP98-204ENST00000397004 C3P1Q6ZMU1 363 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms