RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MBOAT2Q6ZWT7 520 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 MCATQ8IVS2 390 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 CDH26Q8IXH8 852 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CSNK1A1LQ8N752 337 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SYT14Q8NB59 555 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR7G2Q8NG99 324 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR4C6Q8NH72 309 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NANPQ8TBE9 248 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SPPL2AQ8TCT8 520 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 HAVCR2Q8TDQ0 301 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 C2CD4CQ8TF44 421 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RERGQ96A58 199 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SLC35A4Q96G79 324 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ERMAPQ96PL5 475 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 SDF2Q99470 211 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PRSS27Q9BQR3 290 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZNF559Q9BR84 538 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 WDR54Q9H977 334 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 BEX1Q9HBH7 125 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CD93Q9NPY3 652 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SERTAD3Q9UJW9 196 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RPL36Q9Y3U8 105 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 PCDHGA5Q9Y5G8 931 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 IGHV1OR21-1A0A087WYE8 117 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR6C74A6NCV1 312 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 PPM1DO15297 605 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SIGLEC6O43699 453 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 LRATO95237 230 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TXNDC12O95881 172 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 IGHA1P01876 353 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 APOC1P02654 83 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SYPP08247 313 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RNF224P0DH78 156 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 FGF5P12034 268 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RNH1P13489 461 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 CERS1P27544 350 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 GABRA5P31644 462 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 EMDP50402 254 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 GPR143P51810 404 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NCBP2P52298 156 aaKnown RBP eCLIP4.92□□□□□ -1.62
VPS41-203ENST00000395969 CAV3P56539 151 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 RPS4XP62701 263 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 GABREP78334 506 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 FABP5Q01469 135 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 FHL1Q13642 323 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 KLHL26Q53HC5 615 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 HACD4Q5VWC8 232 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZNF57Q68EA5 555 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 ATRAIDQ6UW56 229 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 Q6ZS52 159 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZFP82Q8N141 532 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ARIH2OSQ8N7S6 290 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 BOLLQ8N9W6 283 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZBTB34Q8NCN2 500 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NUP43Q8NFH3 380 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR4D11Q8NGI4 311 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 OR52J3Q8NH60 311 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 CCL4L1Q8NHW4 92 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 SAP25Q8TEE9 199 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 GANCQ8TET4 914 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TSACCQ96A04 125 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 INTS12Q96CB8 462 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 OTUB1Q96FW1 271 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 ESRP2Q9H6T0 727 aaKnown RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 TBC1D17Q9HA65 648 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 NMNAT1Q9HAN9 279 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 HCN3Q9P1Z3 774 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 ZNF443Q9Y2A4 671 aaPredicted RBP4.92□□□□□ -1.62
VPS41-203ENST00000395969 MAP4K5Q9Y4K4 846 aa4.92□□□□□ -1.62
VPS41-203ENST00000395969 TRDV1A0A1B0GX56 115 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 HSPB2A8KAH6 182 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 H0Y8X5 98 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SLC31A1O15431 190 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 DOK2O60496 412 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SNAPINO95295 136 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GASTP01350 101 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 LPLP06858 475 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 H1F0P07305 194 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 CD63P08962 238 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 AHCYP23526 432 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 CD1CP29017 333 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 EPHA8P29322 1005 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 ETV5P41161 510 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 AVPR1BP47901 424 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 INPP1P49441 399 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SUMO3P55854 103 aaPredicted RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 HSD11B2P80365 405 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 DEFA5Q01523 94 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 CSTF1Q05048 431 aaKnown RBP4.91□□□□□ -1.62
VPS41-203ENST00000395969 IL10RAQ13651 578 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 OPCMLQ14982 345 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 TRAM2Q15035 370 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 HSPB2Q16082 182 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 SGCAQ16586 387 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 GSG1Q2KHT4 349 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 C5orf46Q6UWT4 87 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 C3P1Q6ZMU1 363 aa4.91□□□□□ -1.62
VPS41-203ENST00000395969 ZNF704Q6ZNC4 412 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms