RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 OLFML2AQ68BL7 652 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 LRP11Q86VZ4 500 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 JADE3Q92613 823 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 UBE2FQ969M7 185 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 DNAJA3Q96EY1 480 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 EGLN2Q96KS0 407 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 ZNF382Q96SR6 550 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 INTS9Q9NV88 658 aaKnown RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 TESQ9UGI8 421 aaKnown RBP11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 CHRNA9Q9UGM1 479 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 KCNE3Q9Y6H6 103 aa11.65□□□□□ -0.54
VCPKMT-201ENST00000395859 TMEM229AB2RXF0 380 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 PDPK1O15530 556 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 PLXNB1O43157 2135 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 TRAF3IP2O43734 574 aaPredicted RBP11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 TBX19O60806 448 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 SMIM24O75264 130 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 IMPDH2P12268 514 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 MAGEA12P43365 314 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 CCT5P48643 541 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 CCR4P51679 360 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 CLCQ05315 142 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 BTKQ06187 659 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 AP1ARQ63HQ0 302 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 KRT80Q6KB66 452 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 CDC73Q6P1J9 531 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 SPATC1Q76KD6 591 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 FAM71CQ8NEG0 241 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 CDC26Q8NHZ8 85 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 MZB1Q8WU39 189 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 FAM120BQ96EK7 910 aaKnown RBP11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 AURKBQ96GD4 344 aaPredicted RBP11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 PIF1Q9H611 641 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 BEX1Q9HBH7 125 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 SIRT3Q9NTG7 399 aaPredicted RBP11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 TMEM181Q9P2C4 612 aa11.64□□□□□ -0.55
VCPKMT-201ENST00000395859 A0A096LPE4 126 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 CENPVL1A0A0U1RR11 272 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 A8MT66 165 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 EIF1BO60739 113 aaKnown RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 NDUFA7O95182 113 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 NGFP01138 241 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 PRB2P02812 416 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 HMGN2P05204 90 aaKnown RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 GSTA1P08263 222 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 TFPIP10646 304 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 ATP6V1C1P21283 382 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 FKBP2P26885 142 aaKnown RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 MVKQ03426 396 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 MAD2L1BPQ15013 274 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 TAF9Q16594 264 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 DCST2Q5T1A1 773 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 AAED1Q7RTV5 226 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 ABHD12BQ7Z5M8 362 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 TMCO5AQ8N6Q1 288 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 BHLHE22Q8NFJ8 381 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 IL17RDQ8NFM7 739 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 OR4F5Q8NH21 305 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 METTL6Q8TCB7 284 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 TMEM234Q8WY98 164 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF75AQ96N20 296 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 SOX21Q9Y651 276 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 SPIN1Q9Y657 262 aaPredicted RBP11.63□□□□□ -0.55
VCPKMT-201ENST00000395859 TMEM120BA0PK00 339 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 CLPSL1A2RUU4 121 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ANKRD28O15084 1053 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 TYROBPO43914 113 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 RSL1D1O76021 490 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF35P13682 527 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 LSP1P33241 339 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 PCGF2P35227 344 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 GLRXP35754 106 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ARR3P36575 388 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 MAGEB1P43366 347 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 RAG2P55895 527 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 OR2B6P58173 313 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 SLC35A1P78382 337 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 HLXQ14774 488 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 LASP1Q14847 261 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ZNF141Q15928 474 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 FXNQ16595 210 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 UNC50Q53HI1 259 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 PDZK1Q5T2W1 519 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ANKRD26P1Q6NSI1 321 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 WDFY1Q8IWB7 410 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 APOPT1Q96IL0 206 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 ALKBH3Q96Q83 286 aaPredicted RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 MRPL57Q9BQC6 102 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 SYT3Q9BQG1 590 aa11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
VCPKMT-201ENST00000395859 NMUR2Q9GZQ4 415 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms