RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ZNF524Q96C55 264 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 PIK3IP1Q96FE7 263 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 BOD1Q96IK1 185 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 C18orf12Q96KH6 178 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 PPP1R36Q96LQ0 422 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 C7orf26Q96N11 449 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 OR52E6Q96RD3 313 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 THUMPD3Q9BV44 507 aaKnown RBP5.42□□□□□ -1.54
PTPN20-208ENST00000395727 KLHL4Q9C0H6 718 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 ACTR6Q9GZN1 396 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 CENPHQ9H3R5 247 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 MS4A5Q9H3V2 200 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 MANSC1Q9H8J5 431 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 MTHFD2LQ9H903 347 aaPredicted RBP5.42□□□□□ -1.54
PTPN20-208ENST00000395727 TMBIM4Q9HC24 238 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 ZNF701Q9NV72 531 aaPredicted RBP5.42□□□□□ -1.54
PTPN20-208ENST00000395727 NKIRAS1Q9NYS0 192 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 EMC3Q9P0I2 261 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 C6orf203Q9P0P8 240 aaPredicted RBP5.42□□□□□ -1.54
PTPN20-208ENST00000395727 MALT1Q9UDY8 824 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 CHRNA9Q9UGM1 479 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 CLEC4AQ9UMR7 237 aa5.42□□□□□ -1.54
PTPN20-208ENST00000395727 ITPR3Q14573 2671 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 NF1P21359 2839 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 A0A096LPI6 279 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 FAM171A2A8MVW0 826 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ZNF814B7Z6K7 855 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 SULT2B1O00204 365 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 RFXANKO14593 260 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 HS3ST1O14792 307 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 EIF1BO60739 113 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 SMPD2O60906 423 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 SLC22A3O75751 556 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 PGM3O95394 542 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CPSF4O95639 269 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 FESP07332 822 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CHRM4P08173 479 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 UQCRBP14927 111 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 HOXB9P17482 250 aaPredicted RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CDKN2CP42773 168 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 SLC1A3P43003 542 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CCR4P51679 360 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CRISP3P54108 245 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 MAGOHP61326 146 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 RASGEF1BQ0VAM2 473 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 MERTKQ12866 999 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 FADDQ13158 208 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 MAPK11Q15759 364 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 SYPL1Q16563 259 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 EXOC3L2Q2M3D2 409 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 LIN52Q52LA3 116 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 GPAT3Q53EU6 434 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 TIMM23BQ5SRD1 257 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 NCMAPQ5T1S8 102 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 LRIF1Q5T3J3 769 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 PPP4R4Q6NUP7 873 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ZNF704Q6ZNC4 412 aaPredicted RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 NUFIP2Q7Z417 695 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 MAVSQ7Z434 540 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 GALNT5Q7Z7M9 940 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ADGRG3Q86Y34 549 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 TUSC5Q8IXB3 177 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 PEX5LQ8IYB4 626 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CLEC4FQ8N1N0 589 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ANKRD42Q8N9B4 389 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 WFDC11Q8NEX6 87 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 WDR60Q8WVS4 1066 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 RAB8BQ92930 207 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 S100PBPQ96BU1 408 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ZG16BQ96DA0 208 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ZHX1-C8orf76Q96EF9 292 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ITCHQ96J02 903 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 OR5B2Q96R09 309 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CCL19Q99731 98 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 AMBRA1Q9C0C7 1298 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 QRSL1Q9H0R6 528 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 POFUT1Q9H488 388 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 RAD21L1Q9H4I0 556 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 ESRP2Q9H6T0 727 aaKnown RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 WDR55Q9H6Y2 383 aaPredicted RBP5.41□□□□□ -1.54
PTPN20-208ENST00000395727 RMND5AQ9H871 391 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 BCL2L10Q9HD36 194 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 CTPS2Q9NRF8 586 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 TMEM181Q9P2C4 612 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 P2RX2Q9UBL9 471 aa5.41□□□□□ -1.54
PTPN20-208ENST00000395727 MED13LQ71F56 2210 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 A0A0G2JPF8 293 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 FAM234BA2RU67 622 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CDHR4A6H8M9 788 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 CFAP73A6NFT4 308 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 OR5H1A6NKK0 313 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 HNRNPCL2B2RXH8 293 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 HNRNPCL3B7ZW38 293 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 OVOL3O00110 214 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 PDLIM1O00151 329 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 UBDO15205 165 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 HNRNPCL1O60812 293 aaKnown RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 BCAS1O75363 584 aaPredicted RBP5.4□□□□□ -1.54
PTPN20-208ENST00000395727 OPN1LWP04000 364 aa5.4□□□□□ -1.54
PTPN20-208ENST00000395727 TFPTP0C1Z6 253 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms