RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 P2RY2P41231 377 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.31
CLIP2-203ENST00000395060 AMZ1Q400G9 498 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 LRRN1Q6UXK5 716 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 HDDC2Q7Z4H3 204 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 PAQR7Q86WK9 346 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 PDZD9Q8IXQ8 264 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 OR5T3Q8NGG3 340 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 LRRC46Q96FV0 321 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.31
CLIP2-203ENST00000395060 A0A1B0GUH1 482 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TSPAN11A1L157 253 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 VEGFDO43915 354 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TGM6O95932 706 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 GK2Q14410 553 aaPredicted RBP13.14□□□□□ -0.31
CLIP2-203ENST00000395060 DCST2Q5T1A1 773 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 MUC20Q8N307 709 aaPredicted RBP13.14□□□□□ -0.31
CLIP2-203ENST00000395060 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 C10orf53Q8N6V4 93 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 BVESQ8NE79 360 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR1S1Q8NH92 325 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 SFXN5Q8TD22 340 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 ASB12Q8WXK4 309 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 Q96M85 177 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 MFFQ9GZY8 342 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TAS2R3Q9NYW6 316 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 CCSO14618 274 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 GPANK1O95872 356 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 ADH5P11766 374 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 IFNGR1P15260 489 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 GALP22466 123 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 EEF1A1P68104 462 aaKnown RBP13.14□□□□□ -0.31
CLIP2-203ENST00000395060 NRROSQ86YC3 692 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 GATSQ8NAP1 163 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR2L3Q8NG85 312 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR4N2Q8NGD1 307 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR51S1Q8NGJ8 323 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 OR10G6Q8NH81 332 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 MS4A4EQ96PG1 132 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 CNN2Q99439 309 aaKnown RBP13.14□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF416Q9BWM5 594 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 GPN1Q9HCN4 374 aaPredicted RBP13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TCF7L1Q9HCS4 588 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 STARD5Q9NSY2 213 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 ADAM29Q9UKF5 820 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 NPTNQ9Y639 398 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 LRRK1Q38SD2 2015 aa13.14□□□□□ -0.31
CLIP2-203ENST00000395060 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SERPINA3P01011 423 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 B3GNTL1Q67FW5 361 aaPredicted RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GLB1L2Q8IW92 636 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 LINC00615Q96LM1 132 aaPredicted RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 V9GY05 133 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 A0A1B0GWA3 101 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GTF2F2P13984 249 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GABRA1P14867 456 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 MYOGP15173 224 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 PGDP52209 483 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 EFNB2P52799 333 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 TAS2R20P59543 309 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 RAP2BP61225 183 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 ERN2Q76MJ5 926 aaKnown RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 MRPL43Q8N983 215 aaKnown RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 OR51A4Q8NGJ6 313 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 OR10K1Q8NGX5 313 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SCARB1Q8WTV0 552 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 ZNF768Q9H5H4 540 aaKnown RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM185BQ9H7F4 350 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SRA1Q9HD15 236 aaKnown RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FLRT3Q9NZU0 649 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 MED11Q9P086 117 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 OPN4Q9UHM6 478 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FBXO4Q9UKT5 387 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 SPTBN5Q9NRC6 3674 aaKnown RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 F5P12259 2224 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 TMEM72A0PK05 275 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 FAM25EA8MYX2 175 aa13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GALR3O60755 368 aaPredicted RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 CDC123O75794 336 aaPredicted RBP13.13□□□□□ -0.31
CLIP2-203ENST00000395060 GIPP09681 153 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms