RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CSRP2Q16527 193 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 FAM69AQ5T7M9 428 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TMEM81Q6P7N7 255 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 C5orf46Q6UWT4 87 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 USP43Q70EL4 1123 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TUBA1AQ71U36 451 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 ACBD7Q8N6N7 88 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 TMEM99Q8N816 258 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 FAM98AQ8NCA5 519 aaKnown RBP13.55□□□□□ -0.24
CCT4-201ENST00000394440 RASD2Q96D21 266 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 SLIRPQ9GZT3 109 aaKnown RBP13.55□□□□□ -0.24
CCT4-201ENST00000394440 RNF167Q9H6Y7 350 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 MED11Q9P086 117 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 FOXJ2Q9P0K8 574 aa13.55□□□□□ -0.24
CCT4-201ENST00000394440 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 IMPA2O14732 288 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 SLC25A12O75746 678 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 LALBAP00709 142 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 ATP6V1E1P36543 226 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 CRYBB2P43320 205 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 DHRS13Q6UX07 377 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 PIP4P1Q86T03 277 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 KLHL36Q8N4N3 616 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 OR9Q1Q8NGQ5 310 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 ZPLD1Q8TCW7 415 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 GATAD2BQ8WXI9 593 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 Q96M85 177 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 METTL7AQ9H8H3 244 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 CPNE5Q9HCH3 593 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 PPP4R1LQ9P1A2 415 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 SEC14L4Q9UDX3 406 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 LOC100506127A0A0U1RQW1 187 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 OR6C68A6NDL8 312 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 SDHAP31040 664 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 CTXN1P60606 82 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 RPS3AP61247 264 aaKnown RBP13.54□□□□□ -0.24
CCT4-201ENST00000394440 RPS7P62081 194 aaKnown RBP13.54□□□□□ -0.24
CCT4-201ENST00000394440 DGUOKQ16854 277 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 SLC25A53Q5H9E4 307 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 LIPKQ5VXJ0 399 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 GDPGP1Q6ZNW5 385 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 LINC00299Q6ZSB3 139 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 NTNG2Q96CW9 530 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 FRMD6Q96NE9 622 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 NMNAT3Q96T66 252 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 ZNF160Q9HCG1 818 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 INPP5EQ9NRR6 644 aa13.54□□□□□ -0.24
CCT4-201ENST00000394440 YARS2Q9Y2Z4 477 aaKnown RBP13.54□□□□□ -0.24
CCT4-201ENST00000394440 SF3B6Q9Y3B4 125 aaKnown RBP13.54□□□□□ -0.24
CCT4-201ENST00000394440 SPIN1Q9Y657 262 aaPredicted RBP13.54□□□□□ -0.24
CCT4-201ENST00000394440 TEX13CA0A0J9YWL9 993 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 FTCDNL1E5RQL4 147 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 ENTPD1P49961 510 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 POU4F2Q12837 409 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 SGCBQ16585 318 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 MOGQ16653 247 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 MAMDC2Q7Z304 686 aaPredicted RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 GLRX5Q86SX6 157 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 KBTBD8Q8NFY9 601 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 OR6S1Q8NH40 331 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 TRMT61AQ96FX7 289 aaKnown RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 SDHAF3Q9NRP4 125 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 WDR70Q9NW82 654 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 TAS2R5Q9NYW4 299 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 STUB1Q9UNE7 303 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 FARSAQ9Y285 508 aaKnown RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 F13BP05160 661 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 TGM1P22735 817 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 PSMA1P25786 263 aaKnown RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 APOBEC1P41238 236 aaKnown RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 SNTA1Q13424 505 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 IL10RAQ13651 578 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 SSPNQ14714 243 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 HES3Q5TGS1 186 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 OPN5Q6U736 354 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
CCT4-201ENST00000394440 TSPAN32Q96QS1 320 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 OR11A1Q9GZK7 315 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 DOCK10Q96BY6 2186 aa13.53□□□□□ -0.24
CCT4-201ENST00000394440 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 TP53I11O14683 189 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 CDKN2AP42771 156 aaKnown RBP13.52□□□□□ -0.24
CCT4-201ENST00000394440 SLC16A1P53985 500 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 FOXF1Q12946 379 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 GALEQ14376 348 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 PLPPR5Q32ZL2 321 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 EMC4Q5J8M3 183 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 SLC35D3Q5M8T2 416 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 FADS6Q8N9I5 356 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 OR2M3Q8NG83 312 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 OR5J2Q8NH18 312 aa13.52□□□□□ -0.24
CCT4-201ENST00000394440 SPRYD4Q8WW59 207 aaPredicted RBP13.52□□□□□ -0.24
CCT4-201ENST00000394440 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms