RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CAPZA2P47755 286 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 MAT1AQ00266 395 aaKnown RBP12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 NPSR1Q6W5P4 371 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 OR11G2Q8NGC1 345 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 TTC9Q92623 222 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 RIT1Q92963 219 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 SLC25A38Q96DW6 304 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 SEC22CQ9BRL7 303 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 LIN7BQ9HAP6 207 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.37
GAPVD1-205ENST00000394084 CACNA1CQ13936 2221 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 ARPC1BO15143 372 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 LINC01565O15544 149 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 PEX14O75381 377 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 ZFPL1O95159 310 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 CSTAP01040 98 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 S1PR1P21453 382 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 RAB38P57729 211 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 STX4Q12846 297 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 EXOSC2Q13868 293 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 GAS6Q14393 721 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 LEG1Q6P5S2 330 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 NLRC3Q7RTR2 1065 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 LSMEM1Q8N8F7 131 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 OR2T4Q8NH00 348 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 OR4C3Q8NH37 302 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 RGP1Q92546 391 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 Q96M85 177 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 POLE3Q9NRF9 147 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 GLTPQ9NZD2 209 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 IFITM5A6NNB3 132 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 GSTZ1O43708 216 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 EGFP01133 1207 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 OR8G3PP0DMU2 310 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 RPS15P62841 145 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 HSF2Q03933 536 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 ILF3Q12906 894 aaKnown RBP eCLIP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 SNTA1Q13424 505 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 DYRK1AQ13627 763 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 SLC25A25Q6KCM7 469 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 APOOLQ6UXV4 268 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 LINC00114Q6XXX2 140 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 FTMTQ8N4E7 242 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 DNAAF1Q8NEP3 725 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 NXPE2Q96DL1 559 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 DNAJA3Q96EY1 480 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 RBM18Q96H35 190 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 SORCS2Q96PQ0 1159 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 C7orf50Q9BRJ6 194 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 CLEC4MQ9H2X3 399 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 PPIEQ9UNP9 301 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 OR10H1Q9Y4A9 318 aa12.76□□□□□ -0.37
GAPVD1-205ENST00000394084 A0A0J9YY10 115 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 A0A1B0GTH9 108 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 I3L521 148 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 CFDP00746 253 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 CCR4P51679 360 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 BLVRAP53004 296 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 GGTLC2Q14390 218 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 ZNF550Q7Z398 422 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 FGD2Q7Z6J4 655 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 GRAMD2AQ8IUY3 354 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 SIX5Q8N196 739 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 DDOQ99489 341 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 NARFLQ9H6Q4 476 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 DIABLOQ9NR28 239 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 A0A1B0GVI7 797 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 HRGP04196 525 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 ST6GAL1P15907 406 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 AQP2P41181 271 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 RAD52P43351 418 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 TNFRSF4P43489 277 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 ODF4Q2M2E3 257 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 COL28A1Q2UY09 1125 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 BAIAP2L2Q6UXY1 529 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 METTL27Q8N6F8 245 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 C1orf216Q8TAB5 229 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 SYNPRQ8TBG9 265 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 RSC1A1Q92681 617 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 HGDQ93099 445 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 CCDC120Q96HB5 630 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 LMF1Q96S06 567 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 COQ3Q9NZJ6 369 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 SCP2D1Q9UJQ7 156 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 ZNF281Q9Y2X9 895 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 MPDZO75970 2070 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 TMEM72A0PK05 275 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 H7C1C5 153 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 KRT33AO76009 404 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 APBB3O95704 486 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 PSMB1P20618 241 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 HNRNPA2B1P22626 353 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 DPP4P27487 766 aa12.75□□□□□ -0.37
GAPVD1-205ENST00000394084 HOXD11P31277 338 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms