RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF468Q5VIY5 522 aaPredicted RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 NIPAL3Q6P499 406 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ATCAYQ86WG3 371 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ZNF440Q8IYI8 595 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 IMMP1LQ96LU5 166 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 Q96M85 177 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ZNF649Q9BS31 505 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 NEK6Q9HC98 313 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 CMC2Q9NRP2 79 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 CHRNA9Q9UGM1 479 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 ZNF229Q9UJW7 825 aa13.58□□□□□ -0.24
MKS1-202ENST00000393119 DIMT1Q9UNQ2 313 aaKnown RBP13.58□□□□□ -0.24
MKS1-202ENST00000393119 A0A1W2PQD3 144 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 B4E171 279 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 SNPHO15079 494 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 AIREO43918 545 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 MRPS14O60783 128 aaKnown RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 MT-CO3P00414 261 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 HMGN1P05114 100 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 CXCR1P25024 350 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 ATP6V1E1P36543 226 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 TSPAN7P41732 249 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 P2RX1P51575 399 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 Q0VFX4 171 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 HES3Q5TGS1 186 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 NXNL2Q5VZ03 156 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 B3GNTL1Q67FW5 361 aaPredicted RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 CYP4Z2PQ8N1L4 340 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 FAM98AQ8NCA5 519 aaKnown RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 CAPSLQ8WWF8 208 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 NANSQ9NR45 359 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 C19orf25Q9UFG5 118 aaPredicted RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 FBXL2Q9UKC9 423 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 PADI1Q9ULC6 663 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 PCNX2A6NKB5 2137 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 LOC102723996A0A087X1L8 192 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 CCDC182A6NF36 153 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 C11orf98E9PRG8 122 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 TNFRSF10AO00220 468 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 GPX5O75715 221 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 NDUFB2O95178 105 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 PLGP00747 810 aaPredicted RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 TCF15Q12870 199 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 INSL4Q14641 139 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 ZMYND19Q96E35 227 aaPredicted RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 ARL5BQ96KC2 179 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 TEAD3Q99594 435 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 CDCP1Q9H5V8 836 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 TMEM185BQ9H7F4 350 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 H2AFY2Q9P0M6 372 aaPredicted RBP13.57□□□□□ -0.24
MKS1-202ENST00000393119 A3GALT2U3KPV4 340 aa13.57□□□□□ -0.24
MKS1-202ENST00000393119 DCHS1Q96JQ0 3298 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 TMED7-TICAM2A0A0A6YYA0 188 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 TEX13CA0A0J9YWL9 993 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 FAM172BPA6NC97 362 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 OR6C68A6NDL8 312 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 METTL15A6NJ78 407 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PRR23D1E9PI22 279 aaPredicted RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 EFNA2O43921 213 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 SUSD5O60279 629 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PRR23D2P0DMB1 279 aaPredicted RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 PEPDP12955 493 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 HTR1FP30939 366 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 UGT2B10P36537 528 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 FOLR3P41439 243 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 CBFBQ13951 182 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 ZSWIM7Q19AV6 140 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 C6orf15Q6UXA7 325 aaPredicted RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 MEPCEQ7L2J0 689 aaKnown RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 DEFB124Q8NES8 71 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 HTRA1Q92743 480 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 LRFN5Q96NI6 719 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PTDSS2Q9BVG9 487 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 RACGAP1Q9H0H5 632 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 ASB6Q9NWX5 421 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 TAS2R10Q9NYW0 307 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 TCFL5Q9UL49 500 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 TMED7Q9Y3B3 224 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 ZNF337Q9Y3M9 751 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 SPAARA0A1B0GVQ0 90 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PLD2O14939 933 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 MYL12BO14950 172 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 EIF4E2O60573 245 aaKnown RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 GPANK1O95872 356 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PNMTP11086 282 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 GP1BBP13224 206 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PGCP20142 388 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 SLC6A6P31641 620 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 ARPC4P59998 168 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 RPL18Q07020 188 aaKnown RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 RAB40BQ12829 278 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 ZNF367Q7RTV3 350 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 PPP1R32Q7Z5V6 425 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 CRELD1Q96HD1 420 aa13.56□□□□□ -0.24
MKS1-202ENST00000393119 DCLRE1CQ96SD1 692 aaKnown RBP13.56□□□□□ -0.24
MKS1-202ENST00000393119 TIMP4Q99727 224 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms