RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CLK1P49759 484 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 SSR4P51571 173 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 MLF1P58340 268 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 ERVK-25P63136 954 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 CHAF1BQ13112 559 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 SLC25A53Q5H9E4 307 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 C1orf140Q5VVS0 124 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 C1QL3Q5VWW1 255 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 MAMDC2Q7Z304 686 aaPredicted RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPS19BP1Q86WX3 136 aaKnown RBP10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 NPEPL1Q8NDH3 523 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR52N1Q8NH53 320 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 ASB15Q8WXK1 588 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 GPR87Q9BY21 358 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR51V1Q9H2C8 321 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 KLHL1Q9NR64 748 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 INPP5EQ9NRR6 644 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 NDUFB11Q9NX14 153 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 ERVK13-1Q9NX77 482 aa10.37□□□□□ -0.75
SMARCAL1-203ENST00000392128 CELSR3Q9NYQ7 3312 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 TERTO14746 1132 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR2T1O43869 369 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 CLUP10909 449 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 CPEP16870 476 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 SDHAP31040 664 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 UGT2B10P36537 528 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 MAP2K6P52564 334 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 CTXN1P60606 82 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 RPS7P62081 194 aaKnown RBP10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 POU4F2Q12837 409 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 DNASE1L3Q13609 305 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 EMC4Q5J8M3 183 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 STPG1Q5TH74 334 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR2G6Q5TZ20 316 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ARSKQ6UWY0 536 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 KLHL36Q8N4N3 616 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 PRSS33Q8NF86 280 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 NLGN4YQ8NFZ3 816 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 DYNC2LI1Q8TCX1 351 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 MRGPRX4Q96LA9 322 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ARHGAP9Q9BRR9 750 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR51E2Q9H255 320 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 CDCP1Q9H5V8 836 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 FBXL4Q9UKA2 621 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 HRH3Q9Y5N1 445 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 EML6Q6ZMW3 1958 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZNF208O43345 1280 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 AHSA1O95433 338 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZNF41P51814 821 aaPredicted RBP10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ACSM1Q08AH1 577 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 SGCBQ16585 318 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 IL20RBQ6UXL0 311 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 B3GLCTQ6Y288 498 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 LHFPL3Q86UP9 236 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 PHC2Q8IXK0 858 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ACBD7Q8N6N7 88 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 FADS6Q8N9I5 356 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR2M3Q8NG83 312 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR9Q1Q8NGQ5 310 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR5J2Q8NH18 312 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 RASD2Q96D21 266 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ZHX1-C8orf76Q96EF9 292 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 PRRX2Q99811 253 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 ADGRL4Q9HBW9 690 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
SMARCAL1-203ENST00000392128 PCSK5Q92824 1860 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TEX13CA0A0J9YWL9 993 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 C12orf71A8MTZ7 269 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 FOXD2O60548 495 aaPredicted RBP10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 CLPXO76031 633 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 SBK2P0C263 348 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 SLC16A1P53985 500 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TUBA1BP68363 451 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 LGALS3BPQ08380 585 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 FOXF1Q12946 379 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 DYNC1I2Q13409 638 aaKnown RBP10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 IL10RAQ13651 578 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 GGTLC2Q14390 218 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 PLPPR5Q32ZL2 321 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 SLC35D3Q5M8T2 416 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 LCN1P1Q5VSP4 162 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 GPR139Q6DWJ6 353 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 GDPGP1Q6ZNW5 385 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 USP43Q70EL4 1123 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TUBA1AQ71U36 451 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TBC1D15Q8TC07 691 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 PAQR8Q8TEZ7 354 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 GATAD2BQ8WXI9 593 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TM9SF4Q92544 642 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 NTNG2Q96CW9 530 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 Q96M85 177 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 NMNAT3Q96T66 252 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 NPAS1Q99742 590 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 ASPNQ9BXN1 380 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 TAS2R5Q9NYW4 299 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 SEC14L4Q9UDX3 406 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 VDAC3Q9Y277 283 aa10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 CAB39Q9Y376 341 aaPredicted RBP10.35□□□□□ -0.75
SMARCAL1-203ENST00000392128 OR6C68A6NDL8 312 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms