RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 LTB4R2Q9NPC1 389 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 H3BML4 177 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 ZNF140P52738 457 aaPredicted RBP15.05■□□□□ -0
SHANK1-204ENST00000391814 CLDN20P56880 219 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 ACSM1Q08AH1 577 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 RBPJLQ9UBG7 517 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 NDRG3Q9UGV2 375 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 TRDV1A0A1B0GX56 115 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 TMEM72A0PK05 275 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 KDM4EB2RXH2 506 aaPredicted RBP15.05■□□□□ -0
SHANK1-204ENST00000391814 LDB3O75112 727 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 RNH1P13489 461 aaKnown RBP15.05■□□□□ -0
SHANK1-204ENST00000391814 ZP3P21754 424 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 SLC19A1P41440 591 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 EFNA3P52797 238 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 ZMAT1Q5H9K5 638 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 COX20Q5RI15 118 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 SAXO2Q658L1 398 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 CPEB2Q7Z5Q1 589 aaKnown RBP15.05■□□□□ -0
SHANK1-204ENST00000391814 SKA3Q8IX90 412 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 NANOGP1Q8N7R0 232 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 KHSRPQ92945 711 aaKnown RBP eCLIP15.05■□□□□ -0
SHANK1-204ENST00000391814 ATOH8Q96SQ7 321 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 SEMA4CQ9C0C4 833 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 SLC23A1Q9UHI7 598 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 WIF1Q9Y5W5 379 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 NAV1Q8NEY1 1877 aa15.05■□□□□ -0
SHANK1-204ENST00000391814 TGOLN2O43493 480 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 ACHEP22303 614 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 CNN3Q15417 329 aaKnown RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 PRAMEF8Q5VWM4 474 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 PRAMEF7Q5VXH5 474 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 RTL6Q6ICC9 239 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 BPHLQ86WA6 291 aaPredicted RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 SEMA6DQ8NFY4 1073 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 OR1S2Q8NGQ3 325 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 OR1E3Q8WZA6 343 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 HHLA2Q9UM44 414 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 FLVCR2Q9UPI3 526 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 PAPLNO95428 1278 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 UBL4AP11441 157 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 ELAVL4P26378 380 aaKnown RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 SIRPAP78324 504 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 SGK3Q96BR1 496 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 BMFQ96LC9 184 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 SGPP1Q9BX95 441 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 TRIM77I1YAP6 450 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 SYT5O00445 386 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 SLC16A7O60669 478 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 FAM199XQ6PEV8 388 aaPredicted RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 DBX2Q6ZNG2 339 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 LRRC56Q8IYG6 542 aaPredicted RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 STARD5Q9NSY2 213 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 H7C1C5 153 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 PFKMP08237 780 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 OPRD1P41143 372 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 LCN6P62502 163 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 PTRH1Q86Y79 214 aaKnown RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 HSD17B11Q8NBQ5 300 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 OR52R1Q8NGF1 315 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 AKR7LQ8NHP1 331 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 MZB1Q8WU39 189 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 ZNF587BE7ETH6 402 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 TPOP07202 933 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 EXOSC7Q15024 291 aaKnown RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 TEX261Q6UWH6 196 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 ZNF680Q8NEM1 530 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 OR5M8Q8NGP6 311 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 ANKRD9Q96BM1 317 aaPredicted RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 CAPNS2Q96L46 248 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 KATNB1Q9BVA0 655 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 AMBRA1Q9C0C7 1298 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 MRPS17Q9Y2R5 130 aaKnown RBP15.04■□□□□ -0
SHANK1-204ENST00000391814 PRELID3BQ9Y3B1 194 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 U3KQ87 197 aa15.04■□□□□ -0
SHANK1-204ENST00000391814 TMEM269A0A1B0GVZ9 245 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 TP53I11O14683 189 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 TUSC2O75896 110 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 CCR9P51686 369 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 RAB11AP62491 216 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
SHANK1-204ENST00000391814 SELENBP1Q13228 472 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 HABP2Q14520 560 aaPredicted RBP15.03■□□□□ -0
SHANK1-204ENST00000391814 FAM57BQ71RH2 274 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 DYNC2LI1Q8TCX1 351 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 SLCO4A1Q96BD0 722 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 CMSS1Q9BQ75 279 aaKnown RBP15.03■□□□□ -0
SHANK1-204ENST00000391814 PAAF1Q9BRP4 392 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 PARP4Q9UKK3 1724 aaKnown RBP15.03■□□□□ -0
SHANK1-204ENST00000391814 NQO2P16083 231 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 SRMP19623 302 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 HTR1FP30939 366 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 FAM74A1Q5RGS3 127 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 MOB3CQ70IA8 216 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 GRASPQ7Z6J2 395 aaPredicted RBP15.03■□□□□ -0
SHANK1-204ENST00000391814 PIANPQ8IYJ0 282 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 IRF7Q92985 503 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 OR5B2Q96R09 309 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 ULBP3Q9BZM4 244 aa15.03■□□□□ -0
SHANK1-204ENST00000391814 STC2O76061 302 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms