RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MAGEA5P43359 124 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CXCL12P48061 93 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CYB561P49447 251 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 GPM6AP51674 278 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PRKXP51817 358 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CNN1P51911 297 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ATXN3P54252 364 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CDH4P55283 916 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 NME5P56597 212 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SSTP61278 116 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SLC7A9P82251 487 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 MYBPC1Q00872 1141 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ACVR1Q04771 509 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 RIPPLY1Q0D2K3 151 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 FUT5Q11128 374 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PPP1R8Q12972 351 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SPP2Q13103 211 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 GINS1Q14691 196 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TOMM20Q15388 145 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CHI3L2Q15782 390 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 MEP1BQ16820 701 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ZSWIM7Q19AV6 140 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 HFEQ30201 348 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ADPRMQ3LIE5 342 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TTLL9Q3SXZ7 439 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 FUT11Q495W5 492 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ZBED5Q49AG3 693 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 AARDQ4LEZ3 155 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 BCL7AQ4VC05 210 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SMUG1Q53HV7 270 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PYDC2Q56P42 97 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PCOTHQ58A44 107 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 AP1ARQ63HQ0 302 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 FAHD2BQ6P2I3 314 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PRMT9Q6P2P2 845 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CBLN3Q6UW01 205 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 C16orf54Q6UWD8 224 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CASP12Q6UXS9 341 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SPNS3Q6ZMD2 512 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 LINC00173Q6ZV60 143 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 APTXQ7Z2E3 356 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 C16orf62Q7Z3J2 963 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 VPS36Q86VN1 386 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SLC26A11Q86WA9 606 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 IQCA1Q86XH1 822 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 GRAMD2AQ8IUY3 354 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SERPINA12Q8IW75 414 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SYCP3Q8IZU3 236 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 LRRC43Q8N309 656 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM105Q8N8V8 129 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ST20-AS1Q8NBB2 130 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 LEMD2Q8NC56 503 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 APCDD1LQ8NCL9 501 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 IPMKQ8NFU5 416 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 OR51G2Q8NGK0 314 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 OR1N2Q8NGR9 330 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 OR9A2Q8NGT5 310 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 LINC01560Q8TB33 94 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 KLF14Q8TD94 323 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 RNASE8Q8TDE3 154 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 HGDQ93099 445 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UPRTQ96BW1 309 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TM4SF18Q96CE8 201 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SLC25A36Q96CQ1 311 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 AURKBQ96GD4 344 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 FAHD2AQ96GK7 314 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 NARS2Q96I59 477 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CCT7Q99832 543 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 BAG1Q99933 345 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM246Q9BRR3 403 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CHAC1Q9BUX1 264 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 AP1M1Q9BXS5 423 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CACNG6Q9BXT2 260 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 MRPL9Q9BYD2 267 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ACTR6Q9GZN1 396 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 POLR1EQ9GZS1 481 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 DEFB127Q9H1M4 99 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 SRMSQ9H3Y6 488 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 RPAP3Q9H6T3 665 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 RNF167Q9H6Y7 350 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 YY1AP1Q9H869 796 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CTPS2Q9NRF8 586 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 HOMER3Q9NSC5 361 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TMEM106BQ9NUM4 274 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 AATFQ9NY61 560 aaKnown RBP eCLIP0.03□□□□□ -2.41e-323■□□□□ 9
SNORD28-201ENST00000384706 MRPL39Q9NYK5 338 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 CNIH4Q9P003 139 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 UVRAGQ9P2Y5 699 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 NFKBIL1Q9UBC1 381 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ZNF490Q9ULM2 529 aaPredicted RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 TTLL3Q9Y4R7 772 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 OARD1Q9Y530 152 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 F11RQ9Y624 299 aaKnown RBP0.03□□□□□ -2.4
SNORD28-201ENST00000384706 ICE1Q9Y2F5 2266 aa0.03□□□□□ -2.4
SNORD28-201ENST00000384706 PRR14LQ5THK1 2151 aa0.02□□□□□ -2.41
SNORD28-201ENST00000384706 NSG1A0A0A6YYJ2 146 aa0.02□□□□□ -2.41
SNORD28-201ENST00000384706 IGHV2-70DA0A0C4DH43 119 aa0.02□□□□□ -2.41
SNORD28-201ENST00000384706 A0A0U1RRA0 63 aa0.02□□□□□ -2.41
SNORD28-201ENST00000384706 A0A1B0GUS0 222 aa0.02□□□□□ -2.41
SNORD28-201ENST00000384706 A0A1B0GVI7 797 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms