RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 SRSF6Q13247 344 aaKnown RBP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ITGADQ13349 1161 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ALG10Q5BKT4 473 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ZNF362Q5T0B9 420 aaPredicted RBP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 FAM69AQ5T7M9 428 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 NXNL2Q5VZ03 156 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ARHGAP11AQ6P4F7 1023 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ZNF227Q86WZ6 799 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 GALNT16Q8N428 558 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 LRRC75AQ8NAA5 344 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 PSD4Q8NDX1 1056 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 OR52E2Q8NGJ4 325 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 OR5M1Q8NGP8 315 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 FAR1Q8WVX9 515 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 RFKQ969G6 155 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 ZBTB8AQ96BR9 441 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 TMEM80Q96HE8 168 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 GNRHR2Q96P88 292 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 NRIP3Q9NQ35 241 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 HINT3Q9NQE9 182 aaKnown RBP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 LRFN1Q9P244 771 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 MPDZO75970 2070 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 EML6Q6ZMW3 1958 aa13.12□□□□□ -0.31
SYNGR1-204ENST00000381535 IRGMA1A4Y4 181 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 FAM183AA6NL82 134 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ZNF99A8MXY4 864 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 M0R3G1 203 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ARPC3O15145 178 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 CD14P08571 375 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TSPAN19P0C672 248 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 IL11P20809 199 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ACVR2AP27037 513 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 GRPRP30550 384 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 UQCRC1P31930 480 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TTKP33981 857 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 DNASE1L1P49184 302 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 CDH11P55287 796 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 SOX8P57073 446 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 FOXK1P85037 733 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 RPL18Q07020 188 aaKnown RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TUBA3CQ13748 450 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 RAB39AQ14964 217 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 MFSD13AQ14CX5 517 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 SPINK14Q6IE38 97 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PLBD1Q6P4A8 553 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TUBA3EQ6PEY2 450 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 CCDC81Q6ZN84 652 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 LINC00696Q6ZRV3 163 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 MEPCEQ7L2J0 689 aaKnown RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 FAM98AQ8NCA5 519 aaKnown RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 MFSD8Q8NHS3 518 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 RORBQ92753 470 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PTP4A1Q93096 173 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 MUL1Q969V5 352 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 RELTQ969Z4 430 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 LGALS12Q96DT0 336 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 RNFT2Q96EX2 444 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TAPBPLQ9BX59 468 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ASPNQ9BXN1 380 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 TAS2R5Q9NYW4 299 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 PLA2G3Q9NZ20 509 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 SPIN1Q9Y657 262 aaPredicted RBP13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 ITPR1Q14643 2758 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 LOC400499M0QZD8 3231 aa13.11□□□□□ -0.31
SYNGR1-204ENST00000381535 CCDC160A6NGH7 325 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 A6NL46 340 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 CDK2AP1O14519 115 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 IMPA2O14732 288 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 ZIC3O60481 467 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 INMTO95050 263 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 OR6A2O95222 327 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 WDPCPO95876 746 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 F13BP05160 661 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 HIST1H1CP16403 213 aaKnown RBP13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 ZNF3P17036 446 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 FKBP2P26885 142 aaKnown RBP13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 HTR1FP30939 366 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 CLN3Q13286 438 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 IRF3Q14653 427 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 TBC1D25Q3MII6 688 aa13.1□□□□□ -0.31
SYNGR1-204ENST00000381535 GLYR1Q49A26 553 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms