RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 GAREM2Q75VX8 874 aa17.5■□□□□ 0.39
SMARCD1-201ENST00000381513 TEX19Q8NA77 164 aa17.5■□□□□ 0.39
SMARCD1-201ENST00000381513 OR4E2Q8NGC2 313 aa17.5■□□□□ 0.39
SMARCD1-201ENST00000381513 ZG16BQ96DA0 208 aa17.5■□□□□ 0.39
SMARCD1-201ENST00000381513 RAB3CQ96E17 227 aa17.5■□□□□ 0.39
SMARCD1-201ENST00000381513 CACNB4O00305 520 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 RHOP08100 348 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 EPCAMP16422 314 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 NAA10P41227 235 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 PRKXP51817 358 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 GUCA2AQ02747 115 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CCINQ13939 588 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 USF2Q15853 346 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 ARL14Q8N4G2 192 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 RNF141Q8WVD5 230 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 GREB1Q4ZG55 1949 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 A0A0B4J2A0 478 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CXorf65A6NEN9 183 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 H3BSH0 61 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 AP4M1O00189 453 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 INHAP05111 366 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 OR4E1P0C645 316 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 S100A2P29034 98 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 FNDC3BQ53EP0 1204 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 LY6G6FQ5SQ64 297 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 STPG1Q5TH74 334 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CCDC107Q8WV48 283 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 PPP1R16AQ96I34 528 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 TSPAN10Q9H1Z9 355 aaPredicted RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 RNF122Q9H9V4 155 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 RHOFQ9HBH0 211 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 OR5V1Q9UGF6 321 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 SHPKQ9UHJ6 478 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 V9GY05 133 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 A0A0C4DFX4 3053 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 RNF222A6NCQ9 220 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 DAOP14920 347 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CAP1Q01518 475 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 PWWP2BQ6NUJ5 590 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CDPF1Q6NVV7 123 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 APOBEC3FQ8IUX4 373 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 MCHR1Q99705 422 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 GFOD1Q9NXC2 390 aa17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 CDV3Q9UKY7 258 aaKnown RBP17.49■□□□□ 0.39
SMARCD1-201ENST00000381513 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 STMND1H3BQB6 276 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 M0R036 132 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 PSMD9O00233 223 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 YIF1AO95070 293 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 FGBP02675 491 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 DPP4P27487 766 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 MECP2P51608 486 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 PJVKQ0ZLH3 352 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 OR6N1Q8NGY5 312 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 SCAMP4Q969E2 229 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 OR2S2Q9NQN1 319 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 RCC2Q9P258 522 aaKnown RBP17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 SLC31A2O15432 143 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 ZNF749O43361 778 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 TBL1XO60907 577 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 MT-ND4LP03901 98 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 KLKB1P03952 638 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 TEAD1P28347 426 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 CD34P28906 385 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 PNLIPRP1P54315 467 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 C10orf91Q5T1B1 145 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 NLGN2Q8NFZ4 835 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 C20orf24Q9BUV8 137 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 EFCAB11Q9BUY7 163 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 SUV39H2Q9H5I1 410 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 SIRT3Q9NTG7 399 aaPredicted RBP17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 ICKQ9UPZ9 632 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 MYO16Q9Y6X6 1858 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 PATJQ8NI35 1801 aa17.48■□□□□ 0.39
SMARCD1-201ENST00000381513 C17orf102A2RUQ5 167 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 F2P00734 622 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 CD3DP04234 171 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 CSN2P05814 226 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 C1GALT1C1LP0DN25 315 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PDHA2P29803 388 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PSEN2P49810 448 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 CTXN3Q4LDR2 81 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 ZNF813Q6ZN06 617 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PARGQ86W56 976 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 ETFBKMTQ8IXQ9 262 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 HAVCR1Q96D42 359 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 SMIM19Q96E16 107 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 C8orf33Q9H7E9 229 aaPredicted RBP17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 KLHL28Q9NXS3 571 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PCDHGA1Q9Y5H4 931 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 A0A1W2PPH5 198 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 SLC34A2O95436 690 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 RAB40ALP0C0E4 278 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 TPT1P13693 172 aaKnown RBP17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 CD80P33681 288 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 SOX2P48431 317 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 RAB5CP51148 216 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PPP2CBP62714 309 aa17.47■□□□□ 0.39
SMARCD1-201ENST00000381513 PPP2CAP67775 309 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms