RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ATG2AQ2TAZ0 1938 aa14.91□□□□□ -0.02
NKX3-1-201ENST00000380871 A0A1B0GVT2 93 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 A8MUA0 341 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CD53P19397 219 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 SIRPAP78324 504 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 PUDPQ08623 228 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF267Q14586 743 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 USP53Q70EK8 1073 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 MS4A15Q8N5U1 240 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 OR52R1Q8NGF1 315 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 SMIM4Q8WVI0 70 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 PCDHGA9Q9Y5G4 932 aaKnown RBP14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CACNA1CQ13936 2221 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 TRIOBPQ9H2D6 2365 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 A0A0B4J2E0 115 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 A0A1B0GX12 115 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 PRR32B1ATL7 298 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 KANSL1Q7Z3B3 1105 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 GATSQ8NAP1 163 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 BAHD1Q8TBE0 780 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 NXPE2Q96DL1 559 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 NMNAT3Q96T66 252 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF576Q9H609 170 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CA10Q9NS85 328 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 PILRAQ9UKJ1 303 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 FANCMQ8IYD8 2048 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 LAMA1P25391 3075 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ABCA7Q8IZY2 2146 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 TRAV1-2A0A0B4J238 106 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 GPR75O95800 540 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 HSF2Q03933 536 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 COL28A1Q2UY09 1125 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ALG10BQ5I7T1 473 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CHMP1BQ7LBR1 199 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 OR6K6Q8NGW6 343 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 NT5CQ8TCD5 201 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ZDHHC1Q8WTX9 485 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 SLC25A38Q96DW6 304 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 TM4SF19Q96DZ7 209 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 ZNF436Q9C0F3 470 aaPredicted RBP14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 TMEM27Q9HBJ8 222 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 MRPL39Q9NYK5 338 aaKnown RBP14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 KCNN3Q9UGI6 736 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CA14Q9ULX7 337 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 MMP17Q9ULZ9 603 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 SPATA2Q9UM82 520 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 CAMK2AQ9UQM7 478 aa14.9□□□□□ -0.02
NKX3-1-201ENST00000380871 BRINP1O60477 761 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 IFNA16P05015 189 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 UCHL1P09936 223 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 BTG2P78543 158 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 PITPNAQ00169 270 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 STX4Q12846 297 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 HSD17B12Q53GQ0 312 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 FAM199XQ6PEV8 388 aaPredicted RBP14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 OR56B4Q8NH76 319 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 TSPAN10Q9H1Z9 355 aaPredicted RBP14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 HRASLSQ9HDD0 168 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 DIABLOQ9NR28 239 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 ABRACLQ9P1F3 81 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 RPS6KB2Q9UBS0 482 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 AUP1Q9Y679 476 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 A0A0J9YY10 115 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 ARPC1BO15143 372 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 OGG1O15527 345 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 PEX14O75381 377 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 GATBO75879 557 aaKnown RBP14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 RAD52P43351 418 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 BLVRAP53004 296 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 POU6F2P78424 691 aaPredicted RBP14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 FZD2Q14332 565 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 RPL13AP3Q6NVV1 102 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 RTL4Q6ZR62 310 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 FCRLAQ7L513 359 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 SLC35F2Q8IXU6 374 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 PRSS58Q8IYP2 241 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 KLHDC7BQ96G42 594 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 MAP3K3Q99759 626 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 SOHLH2Q9NX45 425 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 ZNF224Q9NZL3 707 aa14.89□□□□□ -0.03
NKX3-1-201ENST00000380871 PRAMEF26H0Y7S4 382 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 IGKV1D-16P01601 117 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SMIM10L1P0DMW3 83 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CCR9P51686 369 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 NANOS3P60323 173 aaKnown RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 ACTC1P68032 377 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 ACTA1P68133 377 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 GRK1Q15835 563 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 PRICKLE4Q2TBC4 344 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CDRT4Q8N9R6 151 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 TEX19Q8NA77 164 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 RASD2Q96D21 266 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 SMIM10Q96HG1 83 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CNN2Q99439 309 aaKnown RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CLEC4MQ9H2X3 399 aaPredicted RBP14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 FBRSQ9HAH7 460 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 DUSP22Q9NRW4 184 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 CHRNA9Q9UGM1 479 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 PCOLCE2Q9UKZ9 415 aa14.88□□□□□ -0.03
NKX3-1-201ENST00000380871 ASXL3Q9C0F0 2248 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 427.6 ms