RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 OR8G3PP0DMU2 310 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 Q6ZPB1 254 aaPredicted RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 BPIFB2Q8N4F0 458 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR4M1Q8NGD0 313 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 BABAM2Q9NXR7 383 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 MYO18AQ92614 2054 aaKnown RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 A0A1W2PRD5 423 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 A0A1W2PRF3 423 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 A0A1W2PRM7 423 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 DEGS1O15121 323 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 AK1P00568 194 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 GPLD1P80108 840 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR1Q1Q15612 314 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 TMEM179BQ7Z7N9 219 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 PQLC3Q8N755 202 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR51A4Q8NGJ6 313 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR51A2Q8NGJ7 313 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SMIM14Q96QK8 99 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR7D2Q96RA2 312 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 CHST6Q9GZX3 395 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 PCDHA9Q9Y5H5 950 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 ARPC4-TTLL3A0A0A6YYG9 625 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 K7EQM0 130 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR13C7P0DN81 318 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 RRADP55042 308 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 PPP2CAP67775 309 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 GALEQ14376 348 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 RAB41Q5JT25 222 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 FCRLAQ7L513 359 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR13C2Q8NGS9 318 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 ZFAND1Q8TCF1 268 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 BOD1Q96IK1 185 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 WASH6PQ9NQA3 447 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 TBPP20226 339 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 CSN1S1P47710 185 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 HTR6P50406 440 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 TECRLQ5HYJ1 363 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 AGBL5Q8NDL9 886 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 BRIX1Q8TDN6 353 aaKnown RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 FER1L6-AS2Q96M78 137 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SLC29A1Q99808 456 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 EDEM2Q9BV94 578 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 NRSN2Q9GZP1 204 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 WDR76Q9H967 626 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SLC6A20Q9NP91 592 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 SIX2Q9NPC8 291 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 PENKP01210 267 aaPredicted RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 OPN1MWP04001 364 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OPN1MW2P0DN77 364 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OPN1MW3P0DN78 364 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 UBE2G1P62253 170 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 TMEM268Q5VZI3 342 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 GCNT2Q8N0V5 402 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR5M9Q8NGP3 310 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 OR13C9Q8NGT0 318 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 ADAMTS18Q8TE60 1221 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 THAP7Q9BT49 309 aaPredicted RBP11.57□□□□□ -0.56
CHD3-203ENST00000380358 TMEM43Q9BTV4 400 aa11.57□□□□□ -0.56
CHD3-203ENST00000380358 ACOD1A6NK06 481 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 DNPH1O43598 174 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 JRKO75564 520 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RASAL1O95294 804 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 S1PR4O95977 384 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 DCDP81605 110 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 CYCSP99999 105 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 SIMC1Q8NDZ2 872 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SLC6A18Q96N87 628 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 TMEM208Q9BTX3 173 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR11A1Q9GZK7 315 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RASD1Q9Y272 281 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 NUMBLQ9Y6R0 609 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 DEPDC5O75140 1603 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 ANTXRLA6NF34 631 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 PRRG2O14669 202 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 AQP9O43315 295 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 SRPX2O60687 465 aaPredicted RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 CTBSQ01459 385 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 FUNDC2Q9BWH2 189 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR51E2Q9H255 320 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 PIK3C2BO00750 1634 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RGNQ15493 299 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR6V1Q8N148 313 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 DNAJC5GQ8N7S2 189 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR2M7Q8NG81 312 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 CRLF2Q9HC73 371 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 V9GY05 133 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RNF212BA8MTL3 300 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 RNASET2O00584 256 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 ABCD4O14678 606 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 LYRM1O43325 122 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 HMGN2P05204 90 aaKnown RBP11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR8J3Q8NGG0 315 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 OR4Q3Q8NH05 313 aa11.56□□□□□ -0.56
CHD3-203ENST00000380358 FAM174AQ8TBP5 190 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms