RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZNF23P17027 643 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 BGNP21810 368 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 GTF2E2P29084 291 aaKnown RBP20.09■□□□□ 0.81
U2AF1-202ENST00000380276 SQLEQ14534 574 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 CR1LQ2VPA4 569 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 KRT71Q3SY84 523 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 C1orf140Q5VVS0 124 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 LIPNQ5VXI9 398 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 ATG16L1Q676U5 607 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 WBP2NLQ6ICG8 309 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 CREB3L2Q70SY1 520 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 SLC25A36Q96CQ1 311 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 SORT1Q99523 831 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 PIF1Q9H611 641 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 PNPOQ9NVS9 261 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 ARFGEF3Q5TH69 2177 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 MALRD1Q5VYJ5 2156 aa20.09■□□□□ 0.81
U2AF1-202ENST00000380276 BIRC5O15392 142 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 UPK3AO75631 287 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 BCHEP06276 602 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 PGRP06401 933 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 ALDOCP09972 364 aaKnown RBP20.08■□□□□ 0.81
U2AF1-202ENST00000380276 ROR2Q01974 943 aaKnown RBP20.08■□□□□ 0.81
U2AF1-202ENST00000380276 ANKRD16Q6P6B7 361 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 LRRC34Q8IZ02 419 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 KIRREL3Q8IZU9 778 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 BCL2L2Q92843 193 aaPredicted RBP20.08■□□□□ 0.81
U2AF1-202ENST00000380276 SEC61A2Q9H9S3 476 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 AIG1Q9NVV5 245 aa20.08■□□□□ 0.81
U2AF1-202ENST00000380276 ARPC4-TTLL3A0A0A6YYG9 625 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 SH3PXD2BA1X283 911 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 CDHR4A6H8M9 788 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 OR6C65A6NJZ3 312 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 hCG_2039718K7EN88 272 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 RFXANKO14593 260 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 RGS16O15492 202 aaPredicted RBP20.07■□□□□ 0.8
U2AF1-202ENST00000380276 PDE5AO76074 875 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 SNUPNO95149 360 aaKnown RBP20.07■□□□□ 0.8
U2AF1-202ENST00000380276 VAMP5O95183 116 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 AHSA1O95433 338 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 PAX7P23759 505 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 IL12AP29459 219 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 CALCRP30988 508 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 CRATP43155 626 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 PPOXP50336 477 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 IDH3GP51553 393 aaPredicted RBP20.07■□□□□ 0.8
U2AF1-202ENST00000380276 STX3Q13277 289 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 LINGO2Q7L985 606 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 SPATA21Q7Z572 469 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 KDM8Q8N371 416 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 OR4F15Q8NGB8 312 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 PAIP2Q9BPZ3 127 aaKnown RBP20.07■□□□□ 0.8
U2AF1-202ENST00000380276 PLK3Q9H4B4 646 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 MEAF6Q9HAF1 191 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 DYNLRB1Q9NP97 96 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 CALML5Q9NZT1 146 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 RASD1Q9Y272 281 aa20.07■□□□□ 0.8
U2AF1-202ENST00000380276 ZNF443Q9Y2A4 671 aaPredicted RBP20.07■□□□□ 0.8
U2AF1-202ENST00000380276 VSTM5A8MXK1 200 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 ANP32DO95626 131 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 STAMBPO95630 424 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 TFPTP0C1Z6 253 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 ETFAP13804 333 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 DAOP14920 347 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 SRP14P37108 136 aaKnown RBP20.06■□□□□ 0.8
U2AF1-202ENST00000380276 ACAA2P42765 397 aaKnown RBP20.06■□□□□ 0.8
U2AF1-202ENST00000380276 CLDN17P56750 224 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 IL1RL1Q01638 556 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 LRRC74AQ0VAA2 488 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 NPRL3Q12980 569 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 LARS2Q15031 903 aaKnown RBP20.06■□□□□ 0.8
U2AF1-202ENST00000380276 EFNB3Q15768 340 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 RPS26P11Q5JNZ5 115 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-202ENST00000380276 SVOPLQ8N434 492 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 TRIM44Q96DX7 344 aaPredicted RBP20.06■□□□□ 0.8
U2AF1-202ENST00000380276 BOD1Q96IK1 185 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 SOX7Q9BT81 388 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 CENPHQ9H3R5 247 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 KCNK9Q9NPC2 374 aa20.06■□□□□ 0.8
U2AF1-202ENST00000380276 CELA3BP08861 270 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 PRG2P13727 222 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 APEX1P27695 318 aaKnown RBP20.05■□□□□ 0.8
U2AF1-202ENST00000380276 THBS4P35443 961 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 CAPZA2P47755 286 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 P2RY4P51582 365 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 CHN2P52757 468 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 CRISP3P54108 245 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 OGFOD2Q6N063 350 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 EPHX4Q8IUS5 362 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 ZBTB9Q96C00 473 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 MOV10Q9HCE1 1003 aaKnown RBP20.05■□□□□ 0.8
U2AF1-202ENST00000380276 CRNNQ9UBG3 495 aaPredicted RBP20.05■□□□□ 0.8
U2AF1-202ENST00000380276 ZNF232Q9UNY5 417 aa20.05■□□□□ 0.8
U2AF1-202ENST00000380276 TMEM247A6NEH6 219 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 TM9SF1O15321 606 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 PNMTP11086 282 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 ZNF43P17038 809 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 NPR2P20594 1047 aa20.04■□□□□ 0.8
U2AF1-202ENST00000380276 RPS5P46782 204 aaKnown RBP20.04■□□□□ 0.8
U2AF1-202ENST00000380276 SH3BGRP55822 239 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms