RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 HSD17B8Q92506 261 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 TMEM203Q969S6 136 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SLC41A3Q96GZ6 507 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 SLC7A5P2Q9GIP4 190 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 FN3KQ9H479 309 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 PLSCR3Q9NRY6 295 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 TRPC4Q9UBN4 977 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 C19orf25Q9UFG5 118 aaPredicted RBP7.05□□□□□ -1.28
CDKL5-202ENST00000379996 PISDQ9UG56 409 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CACNA1HO95180 2353 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 CABIN1Q9Y6J0 2220 aa7.05□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF292O60281 2723 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SOCS6O14544 535 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 HPGDSO60760 199 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PTP4A3O75365 173 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TRIM3O75382 744 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 HK1P19367 917 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 MAKP20794 623 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CFL1P23528 166 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 AZGP1P25311 298 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 GPR143P51810 404 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CTBP2P56545 445 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SCN1BQ07699 218 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ST3GAL3Q11203 375 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 EFR3AQ14156 821 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 DDI2Q5TDH0 399 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PRAMEF17Q5VTA0 474 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 LCN10Q6JVE6 187 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CNIH2Q6PI25 160 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 LINC00114Q6XXX2 140 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 NFAM1Q8NET5 270 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TEX47Q8TBZ9 253 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PTPMT1Q8WUK0 201 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SPRYD4Q8WW59 207 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 OSTF1Q92882 214 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CDS1Q92903 461 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 NXPE2Q96DL1 559 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 IP6K3Q96PC2 410 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 DGAT2Q96PD7 388 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 BBS4Q96RK4 519 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 POLE3Q9NRF9 147 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 C20orf141Q9NUB4 165 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 RBFOX1Q9NWB1 397 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CTSFQ9UBX1 484 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PADI1Q9ULC6 663 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ICAM5Q9UMF0 924 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 MAU2Q9Y6X3 613 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 UNC13CQ8NB66 2214 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 RNF13O43567 381 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ALOX12BO75342 701 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 NCR1O76036 304 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TNFSF15O95150 251 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 UMODP07911 640 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 C8orf89P0DMQ9 161 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ANXA11P50995 505 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 GABREP78334 506 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 DUSP5Q16690 384 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TMEM44Q2T9K0 475 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TBRG1Q3YBR2 411 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PLA1AQ53H76 456 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TIPARPQ7Z3E1 657 aaKnown RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 OR8H2Q8N162 312 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 LNX2Q8N448 690 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF615Q8N8J6 731 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 UBQLN3Q9H347 655 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 RANGRFQ9HD47 186 aaPredicted RBP7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CTPS2Q9NRF8 586 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 KLHL21Q9UJP4 597 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SCN3AQ9NY46 2000 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SLC22A31A6NKX4 558 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 A6NL46 340 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TO15178 435 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 RAD1O60671 282 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 FMO6PO60774 539 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ADAM11O75078 769 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 APOA1P02647 267 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 LIPCP11150 499 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF24P17028 368 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CD53P19397 219 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 S100A1P23297 94 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 MTNR1BP49286 362 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 CDH11P55287 796 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 TAS2R41P59536 307 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 DCAF7P61962 342 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 GALK2Q01415 458 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF85Q03923 595 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SSPNQ14714 243 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 FAM131AQ6UXB0 335 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 NRMQ8IXM6 262 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZFP41Q8N8Y5 198 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF441Q8N8Z8 693 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ADAMTS17Q8TE56 1095 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 ZNF721Q8TF20 911 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 PTP4A1Q93096 173 aa7.04□□□□□ -1.28
CDKL5-202ENST00000379996 SDF2Q99470 211 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms