RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SCGB1D4Q6XE38 83 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PRSS35Q8N3Z0 413 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 CELF2-AS1Q8N7Q2 184 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 KIAA1958Q8N8K9 716 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OR13G1Q8NGZ3 307 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ZNF599Q96NL3 588 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 OSMRQ99650 979 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 GPR87Q9BY21 358 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 METTL9Q9H1A3 318 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 CSAG2Q9Y5P2 127 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 FGF4P08620 206 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ERVFC1-1P60608 527 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PM20D1Q6GTS8 502 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SLC2A11Q9BYW1 496 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 C11orf54Q9H0W9 315 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PRAMEF27A3QJZ7 478 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 GLTPD2A6NH11 291 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 HOXC11O43248 304 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 ACAA1P09110 424 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 TNFSF4P23510 183 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 ARG2P78540 354 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 SMUG1Q53HV7 270 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PRAMEF9Q5VWM5 478 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 APOBEC3HQ6NTF7 200 aaKnown RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 C10orf126Q8N4M7 172 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 NKAIN3Q8N8D7 197 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 PACRGQ96M98 296 aaPredicted RBP8.19□□□□□ -1.1
LIG3-202ENST00000378526 FCRL5Q96RD9 977 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 KCNK15Q9H427 330 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 HHLA2Q9UM44 414 aa8.19□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3DA0A087WVF3 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3IA0A087WXS9 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3EA0A087X179 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3KA0A087X1G2 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3FA6NER0 549 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3LB9A6J9 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 EMC8O43402 210 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ABLIM3O94929 683 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GCGP01275 180 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3HP0C7X1 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GPR4P46093 362 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 RNF144AP50876 292 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3GQ6DHY5 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3CQ6IPX1 549 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TMPRSS9Q7Z410 1059 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TBC1D3Q8IZP1 549 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 PLD4Q96BZ4 506 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 MYADMQ96S97 322 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 NUDT22Q9BRQ3 303 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ULBP3Q9BZM4 244 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HES4Q9HCC6 221 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 LAMP3Q9UQV4 416 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ENPP4Q9Y6X5 453 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GPR171O14626 319 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 MMP2P08253 660 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CD37P11049 281 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 BMI1P35226 326 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OXA1LQ15070 435 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 EXT1Q16394 746 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 POM121L1PQ3SYA9 428 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 RAB6CQ53S08 254 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 C6orf136Q5SQH8 315 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 ZNF761Q86XN6 746 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 PRR11Q96HE9 360 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 TAAR1Q96RJ0 339 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CLSTN3Q9BQT9 956 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GORASP2Q9H8Y8 452 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TET3O43151 1660 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 EDDM13A0A1B0GTR0 161 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR5K3A6NET4 321 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 B4DEV8 164 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 SCAMP2O15127 329 aaKnown RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 PLRG1O43660 514 aaKnown RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 EN2P19622 333 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 SHHQ15465 462 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 AADACL3Q5VUY0 350 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OIT3Q8WWZ8 545 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 MED17Q9NVC6 651 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OOEPA6NGQ2 149 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GLOD5A6NK44 160 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 PTHLHP12272 177 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GPM6AP51674 278 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CCR9P51686 369 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 DGKZQ13574 1117 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OTUD1Q5VV17 481 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 AMMECR1LQ6DCA0 310 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 OR5AP2Q8NGF4 316 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 HMGB4Q8WW32 186 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 C4orf36Q96KX1 117 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 EGLN3Q9H6Z9 239 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 TIMM13Q9Y5L4 95 aaPredicted RBP8.18□□□□□ -1.1
LIG3-202ENST00000378526 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 CCDC187A0A096LP49 1063 aa8.18□□□□□ -1.1
LIG3-202ENST00000378526 GRXCR1A8MXD5 290 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms