RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 DAOP14920 347 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 S100A10P60903 97 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 SCGB2A2Q13296 93 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF697Q5TEC3 545 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 OR4F3Q6IEY1 312 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 ERN2Q76MJ5 926 aaKnown RBP10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 OR5B12Q96R08 314 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 NDC1Q9BTX1 674 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 CYSLTR2Q9NS75 346 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 MYOTQ9UBF9 498 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 PADI1Q9ULC6 663 aa10.95□□□□□ -0.66
NPHP4-202ENST00000378161 DUXAA6NLW8 204 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR8U8P0C7N1 319 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 EPXP11678 715 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OSMP13725 252 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CPEP16870 476 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 IL1RNP18510 177 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 NTSP30990 170 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 MTNR1BP49286 362 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CYCSP99999 105 aaKnown RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF791Q3KP31 576 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF789Q5FWF6 425 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CNTN4Q8IWV2 1026 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR5M1Q8NGP8 315 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR8S1Q8NH09 359 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR8U1Q8NH10 309 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 PHOSPHO2Q8TCD6 241 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 PNPLA2Q96AD5 504 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 SLC32A1Q9H598 525 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 MRPL17Q9NRX2 175 aaKnown RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 ABRACLQ9P1F3 81 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CARHSP1Q9Y2V2 147 aaKnown RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 A0A0U1RQF3 1178 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 MT-ND5P03915 603 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 MMP7P09237 267 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 DUOXA1Q1HG43 343 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 RFTN2Q52LD8 501 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 C1orf87Q8N0U7 546 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 BBS1Q8NFJ9 593 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR9A1PQ8NGU1 263 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF596Q8TC21 504 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 ASB13Q8WXK3 278 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 TP53RKQ96S44 253 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CCDC3Q9BQI4 270 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 EBPLQ9BY08 206 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CPEB1Q9BZB8 566 aaKnown RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 NSUN3Q9H649 340 aaKnown RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 RHCGQ9UBD6 479 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 BORCS7-ASMTA0A0B4J1R7 106 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 TRBC2A0A5B9 178 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CDRT15L2A8MXV6 281 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 EOMESO95936 686 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 CSTAP01040 98 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 HOXC4P09017 264 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR10A3P58181 314 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 TAS2R43P59537 309 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 OR1J2Q8NGS2 313 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 SEC22AQ96IW7 307 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 FAM212BQ9NTI7 297 aaPredicted RBP10.94□□□□□ -0.66
NPHP4-202ENST00000378161 FOXJ2Q9P0K8 574 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 SPACA6W5XKT8 324 aa10.94□□□□□ -0.66
NPHP4-202ENST00000378161 A0A1B0GV50 99 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PQBP1O60828 265 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 IL5P05113 134 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 H1F0P07305 194 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 HOXC12P31275 282 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ACAA2P42765 397 aaKnown RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PNLIPRP1P54315 467 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PCGF3Q3KNV8 242 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 DLEU7Q6UYE1 221 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 NHLRC1Q6VVB1 395 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 Q6ZTK2 550 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SLC35D2Q76EJ3 337 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 NUBPLQ8TB37 319 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 M1APQ8TC57 530 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 FBLIM1Q8WUP2 373 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 OTUB2Q96DC9 234 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 TEX37Q96LM6 180 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 NRIP2Q9BQI9 281 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 CST11Q9H112 138 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 LHX9Q9NQ69 397 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF226Q9NYT6 803 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 A4GNTQ9UNA3 340 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 GABRR3A8MPY1 467 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 LOC730098B7Z3J9 87 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 FBXO24O75426 580 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PIAS2O75928 621 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 TOX4O94842 621 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SNAI1O95863 264 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SERPINA5P05154 406 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 S1PR1P21453 382 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF140P52738 457 aaPredicted RBP10.93□□□□□ -0.66
NPHP4-202ENST00000378161 SFXN4Q6P4A7 337 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 TMPRSS11BQ86T26 416 aa10.93□□□□□ -0.66
NPHP4-202ENST00000378161 ZNF687Q8N1G0 1237 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms