RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ACSM3Q53FZ2 586 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 IGSF11Q5DX21 431 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RSBN1Q5VWQ0 802 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 UTS2BQ765I0 119 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RRM2BQ7LG56 351 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 OR11H7Q8NGC8 314 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 OR6C4Q8NGE1 309 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TRMT10AQ8TBZ6 339 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 HMGB4Q8WW32 186 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RASD2Q96D21 266 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ZMYND19Q96E35 227 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 MSANTD3Q96H12 275 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CNN2Q99439 309 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 C12orf10Q9HB07 376 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 MMP25Q9NPA2 562 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CYP8B1Q9UNU6 501 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 BOLA1Q9Y3E2 137 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF337Q9Y3M9 751 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 NPTNQ9Y639 398 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 AUP1Q9Y679 476 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CLCA3PQ9Y6N3 262 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 VPS13AQ96RL7 3174 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 A0A0A6YYJ9 748 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RIIAD1A6NNX1 92 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 IDH3BO43837 385 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 NPIPB7O75200 414 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 SRSF10O75494 262 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 PITPNBP48739 271 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 GZMKP49863 264 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 GFERP55789 205 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RRAS2P62070 204 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 RPS15P62841 145 aaKnown RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 IL18Q14116 193 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CSRP2Q16527 193 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TP53I3Q53FA7 332 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CBLN3Q6UW01 205 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF550Q7Z398 422 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 CEACAM19Q7Z692 300 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 FAM160A2Q8N612 972 aaPredicted RBP8.74□□□□□ -1.01
TRIM39-202ENST00000376659 YIPF7Q8N8F6 280 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 OR52E2Q8NGJ4 325 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 NECTIN4Q96NY8 510 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TSPAN32Q96QS1 320 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 G6PC3Q9BUM1 346 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TMEM27Q9HBJ8 222 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 ERVK-19Q9WJR5 959 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 IER3IP1Q9Y5U9 82 aa8.74□□□□□ -1.01
TRIM39-202ENST00000376659 TRBV5-7A0A0A0MS05 114 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ERVH48-1M5A8F1 160 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 TO15178 435 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 TSPAN2O60636 221 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 BGLAPP02818 100 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SAGP10523 405 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ADRA2CP18825 462 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 NUDT1P36639 197 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 GDI2P50395 445 aaKnown RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 MECP2P51608 486 aaKnown RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ACTA2P62736 377 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ACTG2P63267 376 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 MZT2AQ6P582 158 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ARL9Q6T311 187 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 C9orf40Q8IXQ3 194 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 C9orf62Q8N4C0 152 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 FAM174AQ8TBP5 190 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 DACT3Q96B18 629 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SGTBQ96EQ0 304 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 DERL3Q96Q80 235 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 NMNAT3Q96T66 252 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 UTP23Q9BRU9 249 aaKnown RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 THAP7Q9BT49 309 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 TEX12Q9BXU0 123 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 NIPAL2Q9H841 368 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SLC28A3Q9HAS3 691 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 NLKQ9UBE8 527 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 MRM2Q9UI43 246 aaKnown RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 FRG2CA6NGY1 282 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 TFECO14948 347 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 IGHMP01871 453 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ZP1P60852 638 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SIRPAP78324 504 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ZFP69Q49AA0 526 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 IDNKQ5T6J7 187 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 RPL22L1Q6P5R6 122 aaKnown RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SYT9Q86SS6 491 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 GATAD2AQ86YP4 633 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 TRIM48Q8IWZ4 208 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 ERMAPQ96PL5 475 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SPRTNQ9H040 489 aaPredicted RBP8.73□□□□□ -1.01
TRIM39-202ENST00000376659 SLA2Q9H6Q3 261 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 GALNT9Q9HCQ5 603 aa8.73□□□□□ -1.01
TRIM39-202ENST00000376659 A0A1W2PRG6 482 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 J3QLW9 94 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 GLCEO94923 617 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 ZNF19P17023 458 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 BMP7P18075 431 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 ACVR1BP36896 505 aa8.72□□□□□ -1.01
TRIM39-202ENST00000376659 SRP9P49458 86 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms