RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 FAM53BQ14153 422 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 OLFML2AQ68BL7 652 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 CDH24Q86UP0 819 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 FAM26EQ8N5C1 309 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 BOLLQ8N9W6 283 aaKnown RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 OR5AK2Q8NH90 309 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 S100A16Q96FQ6 103 aaKnown RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 DERL3Q96Q80 235 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 RBP7Q96R05 134 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 RBM24Q9BX46 236 aaKnown RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 GABARAPL1Q9H0R8 117 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 GAREM1Q9H706 876 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 OSGIN1Q9UJX0 560 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 ESPL1Q14674 2120 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 SRPX2O60687 465 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 ITGA5P08648 1049 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 BCKDHBP21953 392 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PSMA3P25788 255 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 TGFBR2P37173 567 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PTH2RP49190 550 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 ZNF425Q6IV72 752 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PAPD4Q6PIY7 484 aaKnown RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 KIAA0907Q7Z7F0 614 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PLPP7Q8NBV4 271 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 C17orf47Q8NEP4 570 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PHF7Q9BWX1 381 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 AICDAQ9GZX7 198 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 ELOVL3Q9HB03 270 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 SUSD2Q9UGT4 822 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 RALGAPA2Q2PPJ7 1873 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 TEX51A0A1B0GUA7 166 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 C9J4A7 227 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 MASP2O00187 686 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 H2BFMP0C1H6 154 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 GSTT2P0CG29 244 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 GSTT2BP0CG30 244 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 LIMS3P0CW19 117 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 LIMS4P0CW20 117 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 GTF2F2P13984 249 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PGAM2P15259 253 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 FOLR1P15328 257 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 SPINK2P20155 84 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 KIAA1024LP59773 190 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 SLC25A35Q3KQZ1 300 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 KCTD9Q7L273 389 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 OR4M1Q8NGD0 313 aa10.22□□□□□ -0.77
HDAC6-203ENST00000376619 DVL3Q92997 716 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 PITHD1Q9GZP4 211 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-203ENST00000376619 LRRC37A2A6NM11 1700 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 EFEMP2O95967 443 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 UCHL1P09936 223 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 JMJD7P0C870 316 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 HTR2AP28223 471 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 HSD11B2P80365 405 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 ZCCHC12Q6PEW1 402 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 NDUFAF7Q7L592 441 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 OR2T4Q8NH00 348 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 REV1Q9UBZ9 1251 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 RCE1Q9Y256 329 aa10.21□□□□□ -0.77
HDAC6-203ENST00000376619 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 C13orf42A0A1B0GVH6 325 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 SERPINA3P01011 423 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 LINC00271P0C7V0 271 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 ELK1P19419 428 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 CD27P26842 260 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 HLA-DMAP28067 261 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 AFF3P51826 1226 aaKnown RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 SCRN3Q0VDG4 424 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 FUT5Q11128 374 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 FGFBP1Q14512 234 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 OXA1LQ15070 435 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 TOMM34Q15785 309 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 ARHGAP11BQ3KRB8 267 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 TMEM176BQ3YBM2 270 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 IRAK1BP1Q5VVH5 260 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 FAM205BPQ63HN1 556 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 HDDC2Q7Z4H3 204 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 GPALPP1Q8IXQ4 340 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 LRRC18Q8N456 261 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 LGALS14Q8TCE9 139 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 RNF170Q96K19 258 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 MESP1Q9BRJ9 268 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 DPAGT1Q9H3H5 408 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 RNF121Q9H920 327 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 FLRT3Q9NZU0 649 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 PLEKHA6Q9Y2H5 1048 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 SCN8AQ9UQD0 1980 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 PATJQ8NI35 1801 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 C5orf67F2Z3F1 127 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 ZNF593O00488 134 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 SURF4O15260 269 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 PPM1BO75688 479 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 AKR7A3O95154 331 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 CLDN6P56747 220 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 UBE2MP61081 183 aaKnown RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 SMAD4Q13485 552 aaKnown RBP10.21□□□□□ -0.78
HDAC6-203ENST00000376619 LIPNQ5VXI9 398 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 LYSMD4Q5XG99 296 aa10.21□□□□□ -0.78
HDAC6-203ENST00000376619 TMEM53Q6P2H8 277 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms