RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
CLCN6-205ENST00000376492 THUMPD3Q9BV44 507 aaKnown RBP11.55□□□□□ -0.56
CLCN6-205ENST00000376492 QRSL1Q9H0R6 528 aaKnown RBP11.55□□□□□ -0.56
CLCN6-205ENST00000376492 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 BCO1Q9HAY6 547 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 A4GALTQ9NPC4 353 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 EXOSC3Q9NQT5 275 aaKnown RBP11.55□□□□□ -0.56
CLCN6-205ENST00000376492 VAPAQ9P0L0 249 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 POU2F3Q9UKI9 436 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 FREM1Q5H8C1 2179 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 DSPPQ9NZW4 1301 aa11.55□□□□□ -0.56
CLCN6-205ENST00000376492 A0A0G2JPF8 293 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 A0A1W2PNR3 127 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 SLC35F4A4IF30 521 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 GJE1A6NN92 205 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 HNRNPCL2B2RXH8 293 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 HNRNPCL3B7ZW38 293 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 LMX1BO60663 402 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 BCAS1O75363 584 aaPredicted RBP11.54□□□□□ -0.56
CLCN6-205ENST00000376492 DBIP07108 87 aaKnown RBP11.54□□□□□ -0.56
CLCN6-205ENST00000376492 NUDT7P0C024 238 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 UBTFL6P0CB48 400 aaPredicted RBP11.54□□□□□ -0.56
CLCN6-205ENST00000376492 HNRNPCL4P0DMR1 293 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 GPX2P18283 190 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 GGT1P19440 569 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 COX5AP20674 150 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 ZNF83P51522 516 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 CRISP3P54108 245 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 MXRA7P84157 204 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PLAURQ03405 335 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 QPRTQ15274 297 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 RAB35Q15286 201 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 RUNDC3AQ59EK9 446 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 TIMM23BQ5SRD1 257 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PRAMEF8Q5VWM4 474 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PRAMEF7Q5VXH5 474 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PGM2L1Q6PCE3 622 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 SLC22A25Q6T423 547 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PEX5LQ8IYB4 626 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 MUC15Q8N387 334 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 TMCO5AQ8N6Q1 288 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 ST8SIA1Q92185 356 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 LRRC58Q96CX6 371 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 RCN3Q96D15 328 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 DHRS9Q9BPW9 319 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 BCL2L10Q9HD36 194 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 KLHL9Q9P2J3 617 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 ABCD2Q9UBJ2 740 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 PRDM4Q9UKN5 801 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 CORO2BQ9UQ03 480 aa11.54□□□□□ -0.56
CLCN6-205ENST00000376492 A0A1W2PR80 420 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 OR5H1A6NKK0 313 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 AIM2O14862 343 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 SMAD9O15198 467 aaKnown RBP11.53□□□□□ -0.56
CLCN6-205ENST00000376492 RAD51DO75771 328 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 CYP7B1O75881 506 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 PGM3O95394 542 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 IGHV3-9P01782 118 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 BCHEP06276 602 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 IL7RP16871 459 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 PGCP20142 388 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 USF1P22415 310 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-205ENST00000376492 THBS2P35442 1172 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 NUDT2P50583 147 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 SESN3P58005 492 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 ZSWIM7Q19AV6 140 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 SLC43A2Q8N370 569 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 POU5F2Q8N7G0 328 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 ZNF433Q8N7K0 673 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-205ENST00000376492 TMEM234Q8WY98 164 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
CLCN6-205ENST00000376492 MCUR1Q96AQ8 359 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 TMEM19Q96HH6 336 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 MUC13Q9H3R2 512 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 ACER3Q9NUN7 267 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 TMEM181Q9P2C4 612 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 PLCE1Q9P212 2302 aa11.53□□□□□ -0.56
CLCN6-205ENST00000376492 EVPLLA8MZ36 301 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 H7C417 338 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 FAAHO00519 579 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CYTIPO60759 359 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 NQO1P15559 274 aaKnown RBP11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CD40P25942 277 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 SLC7A1P30825 629 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 FABP6P51161 128 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 CCR4P51679 360 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 RAC3P60763 192 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLCN6-205ENST00000376492 RASGEF1BQ0VAM2 473 aa11.52□□□□□ -0.57
CLCN6-205ENST00000376492 SAMD4BQ5PRF9 694 aaKnown RBP11.52□□□□□ -0.57
CLCN6-205ENST00000376492 GCNT6Q5T4J0 391 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms