RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 KRT33BQ14525 404 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 UBE2NLQ5JXB2 153 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 OR2A1Q8NGT9 310 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 NSMAFQ92636 917 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 ZNF768Q9H5H4 540 aaKnown RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 GPN1Q9HCN4 374 aaPredicted RBP11.88□□□□□ -0.51
MSH5-204ENST00000375755 MLXQ9UH92 298 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
MSH5-204ENST00000375755 KRT33AO76009 404 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 VSIG10L2P0DP72 767 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 GABRG2P18507 467 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 DCTDP32321 178 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 NRG3P56975 720 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 SCRN3Q0VDG4 424 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 DECR1Q16698 335 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 HFEQ30201 348 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 FAM199XQ6PEV8 388 aaPredicted RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 C16orf58Q96GQ5 468 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 AMDHD1Q96NU7 426 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 NDRG3Q9UGV2 375 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 PRR19A6NJB7 356 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 SNRPGP15A8MWD9 76 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 GABARAPH6UMI1 98 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 MAGEB4O15481 346 aaPredicted RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 ADAM11O75078 769 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 STX11O75558 287 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 IL5P05113 134 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 FXYD6P3P58550 94 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 CSNK1G2P78368 415 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 LTB4RQ15722 352 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 RPE65Q16518 533 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 DCAF12L2Q5VW00 463 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 GDF7Q7Z4P5 450 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 SHISA5Q8N114 240 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 BRIX1Q8TDN6 353 aaKnown RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 UBE2E3Q969T4 207 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 DNTTIP1Q9H147 329 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 OR51V1Q9H2C8 321 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 TCEAL2Q9H3H9 227 aaPredicted RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 FN3KQ9H479 309 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 ACSS1Q9NUB1 689 aaPredicted RBP11.87□□□□□ -0.51
MSH5-204ENST00000375755 KLHL9Q9P2J3 617 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
MSH5-204ENST00000375755 A0A0G2JPF8 293 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 HNRNPCL3B7ZW38 293 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 CDC123O75794 336 aaPredicted RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 AQP8O94778 261 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 UCHL1P09936 223 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 HNRNPCL4P0DMR1 293 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 NT5EP21589 574 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 DLX5P56178 289 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 TAS2R43P59537 309 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 MBOAT2Q6ZWT7 520 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 UBE3DQ7Z6J8 389 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 OR4E2Q8NGC2 313 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 OR10K1Q8NGX5 313 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 ORAI1Q96D31 301 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 UTP23Q9BRU9 249 aaKnown RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 MS4A8Q9BY19 250 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 ANKRD20A5PA0PJZ0 165 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 PYCARD-AS1I3L0S3 204 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 HMGN2P05204 90 aaKnown RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 CLUP10909 449 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 IL9P15248 144 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 MPGP29372 298 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 AP3S2P59780 193 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 POLR2GP62487 172 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSH5-204ENST00000375755 LGALS3BPQ08380 585 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 SERTAD2Q14140 314 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 HES5Q5TA89 166 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 RFLNBQ8N5W9 214 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 TEAD3Q99594 435 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 OR52D1Q9H346 318 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 C6orf106Q9H6K1 298 aaPredicted RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 SLC39A1Q9NY26 324 aa11.86□□□□□ -0.51
MSH5-204ENST00000375755 AKAP7Q9P0M2 348 aaPredicted RBP11.86□□□□□ -0.51
MSH5-204ENST00000375755 SYT5O00445 386 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 PRAMEF2O60811 474 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 NDUFB6O95139 128 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 NOS3P29474 1203 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 FNTBP49356 437 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 CCINQ13939 588 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 FAM209BQ5JX69 171 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 STPG1Q5TH74 334 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 FCRLBQ6BAA4 426 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 ELP2Q6IA86 826 aa11.85□□□□□ -0.51
MSH5-204ENST00000375755 SLC22A8Q8TCC7 542 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms