RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 P2RX6O15547 441 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 SIX6O95475 246 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 EML2O95834 649 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 CEACAM5P06731 702 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 NAGAP17050 411 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 NFYAP23511 347 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 GABRA3P34903 492 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 TSFMP43897 325 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 AGBL4Q5VU57 503 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 FAM71CQ8NEG0 241 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC2A12Q8TD20 617 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 FCAMRQ8WWV6 532 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 GAL3ST3Q96A11 431 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 OR1F2PQ96R84 312 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 CNN2Q99439 309 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 RAB11FIP5Q9BXF6 653 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM27Q9HBJ8 222 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
CLCNKA-202ENST00000375692 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 MCRIP1C9JLW8 97 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 NUPL2O15504 423 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PRAF2O60831 178 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2T7P0C7T2 308 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC6A6P31641 620 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 FBXO42Q6P3S6 717 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 RPL22L1Q6P5R6 122 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 FAM198BQ6UWH4 519 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 OR6M1Q8NGM8 313 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2T27Q8NH04 317 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 LHFPL5Q8TAF8 219 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 ZPLD1Q8TCW7 415 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 RAB7BQ96AH8 199 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PLEKHA1Q9HB21 404 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF275Q9NSD4 429 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 C19orf53Q9UNZ5 99 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 CA5BQ9Y2D0 317 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 MCIDASD6RGH6 385 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 IFNGP01579 166 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 CTRB1P17538 263 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 NANOS3P60323 173 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PPP2CBP62714 309 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PPP2CAP67775 309 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 TFF2Q03403 129 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 POU4F2Q12837 409 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 FHL5Q5TD97 284 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 CTRB2Q6GPI1 263 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PRSS41Q7RTY9 318 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 PAQR7Q86WK9 346 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM52Q8NDY8 209 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 SYNPRQ8TBG9 265 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 THEM6Q8WUY1 208 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 LCORQ96JN0 433 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 EMC3Q9P0I2 261 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF346Q9UL40 294 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 ICAM5Q9UMF0 924 aa12.94□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1B0GVT2 93 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1W2PP55 124 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TCRBV16S1A1N1A0A5B0 115 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 PRR32B1ATL7 298 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ATP6V1G2-DDX39BF2Z307 99 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 SERPINI2O75830 405 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TSPAN9O75954 239 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TMIGD3P0DMS9 266 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TYRP1P17643 537 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 EMDP50402 254 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 P2RX1P51575 399 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 UBE2MP61081 183 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 C2orf68Q2NKX9 166 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM196Q5HYL7 178 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM69Q5SWH9 247 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 RGS7BPQ6MZT1 257 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ARHGAP11AQ6P4F7 1023 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 SYS1Q8N2H4 156 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 OR6K6Q8NGW6 343 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 LCN9Q8WX39 176 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 PMEPA1Q969W9 287 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 DMRTA2Q96SC8 542 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 B3GNT4Q9C0J1 378 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 TSPAN10Q9H1Z9 355 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 PHPT1Q9NRX4 125 aaPredicted RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 OR5V1Q9UGF6 321 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 MRPS2Q9Y399 296 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A0B4J2E0 115 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1B0GX12 115 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 SHISA7A6NL88 538 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 C4orf47A7E2U8 309 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
CLCNKA-202ENST00000375692 H3BSH0 61 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms