RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 KRT33AO76009 404 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 WNT11O96014 354 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 SELENOPP49908 381 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 EGR4Q05215 589 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 LGALS3BPQ08380 585 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 RAB35Q15286 201 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 HIKESHIQ53FT3 197 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
NELFE-201ENST00000375425 EPHX4Q8IUS5 362 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 MSRB3Q8IXL7 192 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 KDM8Q8N371 416 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 MFSD8Q8NHS3 518 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 LRRC8CQ8TDW0 803 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 SLC35B4Q969S0 331 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 SLC25A36Q96CQ1 311 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 SPDL1Q96EA4 605 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 BOD1Q96IK1 185 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 RHNO1Q9BSD3 238 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 TMEM45AQ9NWC5 275 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 FTCDNL1E5RQL4 147 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 AHSA1O95433 338 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
NELFE-201ENST00000375425 ETS2P15036 469 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 RPS5P46782 204 aaKnown RBP12.45□□□□□ -0.42
NELFE-201ENST00000375425 NUDT6P53370 316 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 PAGE3Q5JUK9 113 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 LRIF1Q5T3J3 769 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 C1QTNF12Q5T7M4 302 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 ZNF544Q6NX49 715 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 NIPAL3Q6P499 406 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 C10orf111Q8N326 155 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 NFKBIDQ8NI38 313 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 HTRA1Q92743 480 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 KTI12Q96EK9 354 aaPredicted RBP12.45□□□□□ -0.42
NELFE-201ENST00000375425 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 PTDSS2Q9BVG9 487 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 SLC52A3Q9NQ40 469 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 RPS6KB2Q9UBS0 482 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 ADAM21Q9UKJ8 722 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 RASD1Q9Y272 281 aa12.45□□□□□ -0.42
NELFE-201ENST00000375425 FBN1P35555 2871 aaKnown RBP12.44□□□□□ -0.42
NELFE-201ENST00000375425 PLCE1Q9P212 2302 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
NELFE-201ENST00000375425 ZNF587BE7ETH6 402 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 NR5A2O00482 541 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 LGI1O95970 557 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 PNMTP11086 282 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 PRKAR1BP31321 381 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 APOBEC3AP31941 199 aaPredicted RBP12.44□□□□□ -0.42
NELFE-201ENST00000375425 AQP5P55064 265 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 DMTNQ08495 405 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 GCNT6Q5T4J0 391 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 REEP3Q6NUK4 255 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 LINGO2Q7L985 606 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 PRR14Q9BWN1 585 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 VAPAQ9P0L0 249 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
NELFE-201ENST00000375425 IGHV4-30-2A0A087WSY4 118 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 A0A1B0GWA3 101 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 TPST1O60507 370 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 CRLF1O75462 422 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 UPK3AO75631 287 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 ARAFP10398 606 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 ZNF43P17038 809 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 PPIBP23284 216 aaKnown RBP12.43□□□□□ -0.42
NELFE-201ENST00000375425 GTF2E2P29084 291 aaKnown RBP12.43□□□□□ -0.42
NELFE-201ENST00000375425 CDK6Q00534 326 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 GLIPR1L2Q4G1C9 344 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 AGKQ53H12 422 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 COMTD1Q86VU5 262 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 LSMEM1Q8N8F7 131 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 OR10H5Q8NGA6 315 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 OR1K1Q8NGR3 316 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 TAAR8Q969N4 342 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 ATP6V1G3Q96LB4 118 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
NELFE-201ENST00000375425 C12orf10Q9HB07 376 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 OBP2BQ9NPH6 170 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 SEC14L4Q9UDX3 406 aa12.43□□□□□ -0.42
NELFE-201ENST00000375425 SONP18583 2426 aaKnown RBP12.42□□□□□ -0.42
NELFE-201ENST00000375425 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 OR2T1O43869 369 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 BMP4P12644 408 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 HTR2AP28223 471 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 CLDN17P56750 224 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 CHRNB3Q05901 458 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 TBRG1Q3YBR2 411 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 TTMPQ5BVD1 217 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 HMBOX1Q6NT76 420 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 DHRS4L2Q6PKH6 230 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 CLEC2AQ6UVW9 174 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 C6orf89Q6UWU4 347 aa12.42□□□□□ -0.42
NELFE-201ENST00000375425 KRT73Q86Y46 540 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms