RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OR51A2Q8NGJ7 313 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 FAHD2AQ96GK7 314 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 SLC6A17Q9H1V8 727 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 NIT2Q9NQR4 276 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 A0A1W2PPV4 95 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TRIM77I1YAP6 450 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TCEAL8Q8IYN2 117 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 CELF2-AS1Q8N7Q2 184 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 RNF170Q96K19 258 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 F2RL3Q96RI0 385 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 NEURL2Q9BR09 285 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 NDRG2Q9UN36 371 aaKnown RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 RNF24Q9Y225 148 aa9.49□□□□□ -0.89
PTCH1-204ENST00000375290 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
PTCH1-204ENST00000375290 A0A1W2PRU2 124 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MEN1O00255 615 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SURF4O15260 269 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TGM5O43548 720 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 PIGAP37287 484 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MC3RP41968 323 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SYT14P1Q58G82 188 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TOR2AQ5JU69 321 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 FAM111BQ6SJ93 734 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 OR9K2Q8NGE7 335 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 FRZBQ92765 325 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM18Q96B42 140 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 HRH4Q9H3N8 390 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 LAMB2P55268 1798 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 C1orf105O95561 183 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 HOXA11P31270 313 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 PSMB3P49720 205 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 CTF1Q16619 201 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 LNX2Q8N448 690 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 GHSRQ92847 366 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 NEIL2Q969S2 332 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 GAR1Q9NY12 217 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SLCO2B1O94956 709 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 CNOT4O95628 575 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF620Q6ZNG0 422 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 VRK3Q8IV63 474 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 C20orf27Q9GZN8 174 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 HS3ST2Q9Y278 367 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TCRBV5S2A0A599 114 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ARL3P36405 182 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SMIM15Q7Z3B0 74 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF226Q9NYT6 803 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 CSNK1G3Q9Y6M4 447 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 DUX1O43812 170 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 GABRB1P18505 474 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 PLGLB1Q02325 96 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TANGO2Q6ICL3 276 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 CRTC1Q6UUV9 634 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MARVELD1Q9BSK0 173 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SRRQ9GZT4 340 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 C8orf33Q9H7E9 229 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 DUSP22Q9NRW4 184 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 POT1Q9NUX5 634 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 M0QZK8 103 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 IHHQ14623 411 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 OR1Q1Q15612 314 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF366Q8N895 744 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SLC31A1O15431 190 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SDHBP21912 280 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 IQCF1Q8N6M8 205 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 FAM71CQ8NEG0 241 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ARRDC2Q8TBH0 407 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MTX2O75431 263 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 C6P13671 934 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SSTR2P30874 369 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 RAB33AQ14088 237 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 HEPHL1Q6MZM0 1159 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 LGI3Q8N145 548 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ANKRD9Q96BM1 317 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 UBL7Q96S82 380 aaPredicted RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TAS2R16Q9NYV7 291 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MRPL42Q9Y6G3 142 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 SMIM30A4D0T7 59 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 TXNL1O43396 289 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 C8orf89P0DMQ9 161 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 FBLP22087 321 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 GRB2P62993 217 aaKnown RBP9.48□□□□□ -0.89
PTCH1-204ENST00000375290 RPE65Q16518 533 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 BEND4Q6ZU67 534 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 OR13C8Q8NGS7 320 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 MITD1Q8WV92 249 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 CDS1Q92903 461 aa9.48□□□□□ -0.89
PTCH1-204ENST00000375290 PEX12O00623 359 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 TOX4O94842 621 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 BCKDHBP21953 392 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 Q6ZSR9 355 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 ARHGEF39Q8N4T4 335 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 GPR78Q96P69 363 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 C12orf57Q99622 126 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 NKX3-1Q99801 234 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-204ENST00000375290 M0R3H8 397 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 PTAFRP25105 342 aa9.47□□□□□ -0.89
PTCH1-204ENST00000375290 LCN6P62502 163 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms