RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 UBE2NP61088 152 aaKnown RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 UFM1P61960 85 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 TXNL4AP83876 142 aaKnown RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 SQLEQ14534 574 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZSWIM7Q19AV6 140 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 C3orf36Q3SXR2 165 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF836Q6ZNA1 936 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF621Q6ZSS3 439 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 VRK2Q86Y07 508 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 EPHX4Q8IUS5 362 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF440Q8IYI8 595 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 LRRC34Q8IZ02 419 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF540Q8NDQ6 660 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 PNPT1Q8TCS8 783 aaKnown RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 MAGEE2Q8TD90 523 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 ZNF317Q96PQ6 595 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 HAO1Q9UJM8 370 aa11.97□□□□□ -0.49
CXCL12-202ENST00000374426 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-202ENST00000374426 DSPPQ9NZW4 1301 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 A0A096LPE4 126 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 A0A1W2PPZ6 126 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 A8MVM7 634 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 BIRC5O15392 142 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 NPIPB7O75200 414 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 VAMP5O95183 116 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 STAMBPO95630 424 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 IGKV3-15P01624 115 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 GSNP06396 782 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PGRP06401 933 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PRG2P13727 222 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PAX7P23759 505 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 GIFP27352 417 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 IL2RGP31785 369 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 VSNL1P62760 191 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 HGFACQ04756 655 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 C1orf140Q5VVS0 124 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PRAMEF8Q5VWM4 474 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PRAMEF7Q5VXH5 474 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 WBP2NLQ6ICG8 309 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 OGFOD2Q6N063 350 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 NIPAL3Q6P499 406 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 MYPOPQ86VE0 399 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PEX5LQ8IYB4 626 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 CADM2Q8N3J6 435 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 FAM169BQ8N8A8 192 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 NUP37Q8NFH4 326 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 OR4F15Q8NGB8 312 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 OR52P1PQ8NH57 321 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 OR52E6Q96RD3 313 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 MEAF6Q9HAF1 191 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 PRDM4Q9UKN5 801 aa11.96□□□□□ -0.49
CXCL12-202ENST00000374426 OR6C65A6NJZ3 312 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 TMEM229AB2RXF0 380 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 LILRA1O75019 489 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 CELA3BP08861 270 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 TACSTD2P09758 323 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 TFPTP0C1Z6 253 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 DAOP14920 347 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 SLC1A6P48664 564 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 MVDP53602 400 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 COPZ1P61923 177 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 ROR2Q01974 943 aaKnown RBP11.95□□□□□ -0.5
CXCL12-202ENST00000374426 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 LIPNQ5VXI9 398 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
CXCL12-202ENST00000374426 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 C1orf159Q96HA4 380 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 DOK1Q99704 481 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 LINC00470Q9BZP3 86 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 RAB1BQ9H0U4 201 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF442Q9H7R0 627 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 SLC6A13Q9NSD5 602 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 AIG1Q9NVV5 245 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 RASD1Q9Y272 281 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 CHST2Q9Y4C5 530 aa11.95□□□□□ -0.5
CXCL12-202ENST00000374426 MGAM2Q2M2H8 2515 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 TMEM129A0AVI4 362 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 FTCDNL1E5RQL4 147 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 hCG_2039718K7EN88 272 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF432O94892 652 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 SNUPNO95149 360 aaKnown RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 IGFBP1P08833 259 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 THBS4P35443 961 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 RNF220Q5VTB9 566 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 KDM8Q8N371 416 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 RFLNBQ8N5W9 214 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 AENQ8WTP8 325 aaKnown RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 PTDSS2Q9BVG9 487 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 MOV10Q9HCE1 1003 aaKnown RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 PNPOQ9NVS9 261 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 P2RX2Q9UBL9 471 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 SEC14L4Q9UDX3 406 aa11.94□□□□□ -0.5
CXCL12-202ENST00000374426 FBXO9Q9UK97 447 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-202ENST00000374426 ZNF443Q9Y2A4 671 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms