RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 PAPD4Q6PIY7 484 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 BAGE2Q86Y30 109 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 STT3BQ8TCJ2 826 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CPNE4Q96A23 557 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 RCE1Q9Y256 329 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 ITGB4P16144 1822 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 HMGN2P05204 90 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CD46P15529 392 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 PKLRP30613 574 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 RPL11P62913 178 aaKnown RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 GPR18Q14330 331 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 RSPO2Q6UXX9 243 aaPredicted RBP13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 CHTF18Q8WVB6 975 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 UPRTQ96BW1 309 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 ACPTQ9BZG2 426 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 FBXL2Q9UKC9 423 aa13.32□□□□□ -0.28
TRAF1-201ENST00000373887 ANTXRLA6NF34 631 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR10J4P0C629 311 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TCN2P20062 427 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 PRPH2P23942 346 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 HOXC13P31276 330 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 IDUAP35475 653 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 F2RL1P55085 397 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TESK1Q15569 626 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 IL34Q6ZMJ4 242 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 IDO2Q6ZQW0 420 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 CMIPQ8IY22 773 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR4Q3Q8NH05 313 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ARRDC2Q8TBH0 407 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 SORCS2Q96PQ0 1159 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TCEAL7Q9BRU2 100 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 PCGF2P35227 344 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ATP1B3P54709 279 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 GPR150Q8NGU9 434 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 BPIFA2Q96DR5 249 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 SLC30A3Q99726 388 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 SGPP1Q9BX95 441 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM269A0A1B0GVZ9 245 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 MROH6A6NGR9 719 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 J3KTA2 159 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 HLA-DOBP13765 273 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 NUDT1P36639 197 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 DCTP40126 519 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TAS2R19P59542 299 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 PLA2G7Q13093 441 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF322Q6U7Q0 402 aaPredicted RBP13.31□□□□□ -0.28
TRAF1-201ENST00000373887 LYPD4Q6UWN0 246 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR5K2Q8NHB8 316 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ELOVL3Q9HB03 270 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 CBLCQ9ULV8 474 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 C17orf112F2Z3M2 114 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TP53P04637 393 aaPredicted RBP13.31□□□□□ -0.28
TRAF1-201ENST00000373887 GM2AP17900 193 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 MZT1Q08AG7 82 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 KEAP1Q14145 624 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 KCNAB1Q14722 419 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 NAA40Q86UY6 237 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR4F15Q8NGB8 312 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 OR5L1Q8NGL2 311 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 DUSP19Q8WTR2 217 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TCTN2Q96GX1 697 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM59Q9BXS4 323 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 TGIF2Q9GZN2 237 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 GABRR3A8MPY1 467 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 FCGR2AP12318 317 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ANXA7P20073 488 aaKnown RBP13.31□□□□□ -0.28
TRAF1-201ENST00000373887 AOAHP28039 575 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 MS4A2Q01362 244 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 MSMO1Q15800 293 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 DUSP6Q16828 381 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 ENTPD8Q5MY95 495 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 SKA3Q8IX90 412 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 PGAP2Q9UHJ9 254 aa13.31□□□□□ -0.28
TRAF1-201ENST00000373887 RBPJQ06330 500 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 IKZF1Q13422 519 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 FAM199XQ6PEV8 388 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 GLB1L2Q8IW92 636 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 PDXPQ96GD0 296 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 IL37Q9NZH6 218 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF443Q9Y2A4 671 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 BCKDHBP21953 392 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 SIRPAP78324 504 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 TMEM244Q5VVB8 128 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 FCRLAQ7L513 359 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 MBNL1Q9NR56 388 aaKnown RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 MYOTQ9UBF9 498 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 TRAF3IP2O43734 574 aaPredicted RBP13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ZFAND5O76080 213 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 SDC1P18827 310 aa13.3□□□□□ -0.28
TRAF1-201ENST00000373887 ZNF74Q16587 644 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms