RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 NDUFB2O95178 105 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 NMBP08949 121 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 TMIGD3P0DMS9 266 aaPredicted RBP15.02□□□□□ -0.01
SDC4-201ENST00000372733 SMIM10L1P0DMW3 83 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 NAGAP17050 411 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 RPL4P36578 427 aaKnown RBP15.02□□□□□ -0.01
SDC4-201ENST00000372733 RAP2BP61225 183 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 OC90Q02509 493 aaPredicted RBP15.02□□□□□ -0.01
SDC4-201ENST00000372733 STX4Q12846 297 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 PON3Q15166 354 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 C2orf27AQ580R0 203 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 ZNF626Q68DY1 528 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 LHFPL5Q8TAF8 219 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 RASD2Q96D21 266 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 SMIM10Q96HG1 83 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 OR2A5Q96R48 311 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 STACQ99469 402 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 ZNF346Q9UL40 294 aaKnown RBP15.02□□□□□ -0.01
SDC4-201ENST00000372733 ENTPD2Q9Y5L3 495 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 V9GY05 133 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
SDC4-201ENST00000372733 C4orf47A7E2U8 309 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 PDCD5O14737 125 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 GPRIN2O60269 458 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 SUSD5O60279 629 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 GALR3O60755 368 aaPredicted RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 SIX6O95475 246 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 CCL5P13501 91 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 C4BPBP20851 252 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 NFYAP23511 347 aaPredicted RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 NUP62P37198 522 aaPredicted RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 ACAA2P42765 397 aaKnown RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 DIO1P49895 249 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 TUSC1Q2TAM9 212 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 KIRREL2Q6UWL6 708 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 DNAAF1Q8NEP3 725 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 OR6M1Q8NGM8 313 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 C12orf4Q9NQ89 552 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 DNAJB12Q9NXW2 375 aaKnown RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 FBXL3Q9UKT7 428 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 OR6C68A6NDL8 312 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 ARPC5O15511 151 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 PPM1BO75688 479 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 CPN1P15169 458 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 CTRB1P17538 263 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 SPI1P17947 270 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 SGCGQ13326 291 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 FAM53BQ14153 422 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 CTRB2Q6GPI1 263 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 TRIM43Q96BQ3 446 aaPredicted RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 S100A16Q96FQ6 103 aaKnown RBP15.01□□□□□ -0.01
SDC4-201ENST00000372733 GINS4Q9BRT9 223 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 SRMSQ9H3Y6 488 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 DPP7Q9UHL4 492 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 ZNF281Q9Y2X9 895 aa15.01□□□□□ -0.01
SDC4-201ENST00000372733 A0A1W2PQU0 124 aa15□□□□□ -0.01
SDC4-201ENST00000372733 ITGA10O75578 1167 aa15□□□□□ -0.01
SDC4-201ENST00000372733 RPP14O95059 124 aaKnown RBP15□□□□□ -0.01
SDC4-201ENST00000372733 NDUFB6O95139 128 aa15□□□□□ -0.01
SDC4-201ENST00000372733 VSIG10L2P0DP72 767 aa15□□□□□ -0.01
SDC4-201ENST00000372733 SOX2P48431 317 aa15□□□□□ -0.01
SDC4-201ENST00000372733 TAS2R20P59543 309 aa15□□□□□ -0.01
SDC4-201ENST00000372733 UBE2MP61081 183 aaKnown RBP15□□□□□ -0.01
SDC4-201ENST00000372733 HTRA4P83105 476 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 MGAT2Q10469 447 aa15□□□□□ -0.01
SDC4-201ENST00000372733 PLA2G7Q13093 441 aa15□□□□□ -0.01
SDC4-201ENST00000372733 CBFBQ13951 182 aa15□□□□□ -0.01
SDC4-201ENST00000372733 HLXQ14774 488 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 PDGFRLQ15198 375 aa15□□□□□ -0.01
SDC4-201ENST00000372733 PRICKLE4Q2TBC4 344 aa15□□□□□ -0.01
SDC4-201ENST00000372733 NDUFAF6Q330K2 333 aa15□□□□□ -0.01
SDC4-201ENST00000372733 RGS7BPQ6MZT1 257 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 NUDT18Q6ZVK8 323 aa15□□□□□ -0.01
SDC4-201ENST00000372733 NPEPL1Q8NDH3 523 aa15□□□□□ -0.01
SDC4-201ENST00000372733 OR5M1Q8NGP8 315 aa15□□□□□ -0.01
SDC4-201ENST00000372733 SPPL3Q8TCT6 385 aa15□□□□□ -0.01
SDC4-201ENST00000372733 TM4SF19Q96DZ7 209 aa15□□□□□ -0.01
SDC4-201ENST00000372733 COLEC10Q9Y6Z7 277 aa15□□□□□ -0.01
SDC4-201ENST00000372733 A0A087WV62 115 aa15□□□□□ -0.01
SDC4-201ENST00000372733 PYCARD-AS1I3L0S3 204 aa15□□□□□ -0.01
SDC4-201ENST00000372733 OR2A4O95047 310 aa15□□□□□ -0.01
SDC4-201ENST00000372733 CD1AP06126 327 aa15□□□□□ -0.01
SDC4-201ENST00000372733 LPLP06858 475 aa15□□□□□ -0.01
SDC4-201ENST00000372733 LGALS3BPQ08380 585 aa15□□□□□ -0.01
SDC4-201ENST00000372733 BAMBIQ13145 260 aa15□□□□□ -0.01
SDC4-201ENST00000372733 C2orf68Q2NKX9 166 aa15□□□□□ -0.01
SDC4-201ENST00000372733 DGAT2L6Q6ZPD8 337 aa15□□□□□ -0.01
SDC4-201ENST00000372733 OR4N2Q8NGD1 307 aa15□□□□□ -0.01
SDC4-201ENST00000372733 ST8SIA4Q92187 359 aa15□□□□□ -0.01
SDC4-201ENST00000372733 RNF166Q96A37 237 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 OR2A7Q96R45 310 aa15□□□□□ -0.01
SDC4-201ENST00000372733 MYADMQ96S97 322 aa15□□□□□ -0.01
SDC4-201ENST00000372733 GPN1Q9HCN4 374 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 RABL2AQ9UBK7 228 aaPredicted RBP15□□□□□ -0.01
SDC4-201ENST00000372733 RABL2BQ9UNT1 228 aa15□□□□□ -0.01
SDC4-201ENST00000372733 TP53BP1Q12888 1972 aaPredicted RBP14.99□□□□□ -0.01
SDC4-201ENST00000372733 LGALS8O00214 317 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 BET1O15155 118 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 ADRA2CP18825 462 aa14.99□□□□□ -0.01
SDC4-201ENST00000372733 ADH7P40394 386 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms