RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 EEF1A1P68104 462 aaKnown RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 GPLD1P80108 840 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 REEP5Q00765 189 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 MC2RQ01718 297 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ERV3-1Q14264 604 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PEA15Q15121 130 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 HYAL4Q2M3T9 481 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 Q499Y3 187 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 RFPL4BQ6ZWI9 263 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ACBD4Q8NC06 268 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OR5H6Q8NGV6 325 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OR52N1Q8NH53 320 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 DNMT3BQ9UBC3 853 aaKnown RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ADAM18Q9Y3Q7 739 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 NPFFR2Q9Y5X5 522 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 A0A1B0GWA3 101 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SLC34A2O95436 690 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 CHRNB1P11230 501 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PXNP49023 591 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PFN3P60673 137 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 RAB4BP61018 213 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 RPL23AP62750 156 aaKnown RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SLC35A2P78381 396 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 C18orf63Q68DL7 685 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 C5orf46Q6UWT4 87 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 DPY19L4Q7Z388 723 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 LACC1Q8IV20 430 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 LRRC46Q96FV0 321 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF419Q96HQ0 510 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 FOXN4Q96NZ1 517 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 NOX4Q9NPH5 578 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 NPAP1Q9NZP6 1156 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 GPR137BO60478 399 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SNAPINO95295 136 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ATP1B3P54709 279 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ERVK-16P61578 105 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 FOXK2Q01167 660 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OPCMLQ14982 345 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 OR4K15Q8NH41 348 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 POC1BQ8TC44 478 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 LGALS14Q8TCE9 139 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PAQR8Q8TEZ7 354 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 SLC41A2Q96JW4 573 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 RAB9BQ9NP90 201 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 EHFQ9NZC4 300 aa10.61□□□□□ -0.71
PTPRF-203ENST00000372407 PTRH2Q9Y3E5 179 aaKnown RBP10.61□□□□□ -0.71
PTPRF-203ENST00000372407 ARPC4-TTLL3A0A0A6YYG9 625 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SLC22A23A1A5C7 686 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 OR2A25A4D2G3 310 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ANKRD30BLA7E2S9 258 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 APLNRP35414 380 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 FOLR3P41439 243 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 OR1D4P47884 311 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 RPS27AP62979 156 aaKnown RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 UBA52P62987 128 aaKnown RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 MRPS21P82921 87 aaKnown RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SORDQ00796 357 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ACVR1Q04771 509 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 GAB1Q13480 694 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 DYRK1AQ13627 763 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 NDUFAF7Q7L592 441 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 UBE2FQ969M7 185 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 UBQLN3Q9H347 655 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 C1orf198Q9H425 327 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 CUTCQ9NTM9 273 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 LRIT1Q9P2V4 623 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 LILRB5O75023 590 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 TCRBP04435 133 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF44P15621 663 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 TEAD1P28347 426 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 TACR3P29371 465 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 LTB4RQ15722 352 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SMAD2Q15796 467 aaKnown RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ABHD17CQ6PCB6 329 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SLC22A25Q6T423 547 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 IDO2Q6ZQW0 420 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SLC35D2Q76EJ3 337 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 RLN3Q8WXF3 142 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 GCDHQ92947 438 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 NAT6Q93015 286 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 TCTN2Q96GX1 697 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ARHGAP9Q9BRR9 750 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 AMBRA1Q9C0C7 1298 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 P2RY12Q9H244 342 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 RLIMQ9NVW2 624 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 LUZP4Q9P127 313 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 CAMK2AQ9UQM7 478 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ARAP2Q8WZ64 1704 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF593O00488 134 aaPredicted RBP10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SOCS6O14544 535 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 FABP7O15540 132 aa10.6□□□□□ -0.71
PTPRF-203ENST00000372407 SSX4O60224 188 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms