RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TIMP4Q99727 224 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CMKLR1Q99788 373 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 IFT27Q9BW83 186 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC38A1Q9H2H9 487 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 MRPS30Q9NP92 439 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 TEX10Q9NXF1 929 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 HAO2Q9NYQ3 351 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CNIH4Q9P003 139 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 KLK13Q9UKR3 277 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 FBXL3Q9UKT7 428 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SPATA2Q9UM82 520 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 BAIAP2Q9UQB8 552 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 PMS2P1A4D2B8 440 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 TRABD2BA6NFA1 517 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 DUXAA6NLW8 204 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF593O00488 134 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SULT1B1O43704 296 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SSNA1O43805 119 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 GATBO75879 557 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ARL6IP5O75915 188 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 GIPP09681 153 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CCL4P13236 92 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ENPP1P22413 925 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CALCRP30988 508 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 GCGRP47871 477 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 MECP2P51608 486 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 HSD11B2P80365 405 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 PRDX1Q06830 199 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 TRA2AQ13595 282 aaKnown RBP eCLIP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF267Q14586 743 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 INSL4Q14641 139 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OPCMLQ14982 345 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 CEBPEQ15744 281 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 NHLRC3Q5JS37 347 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 NDUFAF5Q5TEU4 345 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 PXDC1Q5TGL8 231 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 B3GNTL1Q67FW5 361 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 DMKNQ6E0U4 476 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 FAAH2Q6GMR7 532 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 RAB11FIP2Q7L804 512 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OVCH1Q7RTY7 1134 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OVCH2Q7RTZ1 564 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 LNX2Q8N448 690 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF527Q8NB42 609 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 AGBL5Q8NDL9 886 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OR52L1Q8NGH7 329 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OR51G2Q8NGK0 314 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 C15orf40Q8WUR7 153 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC41A3Q96GZ6 507 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OR7D2Q96RA2 312 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 DPH7Q9BTV6 452 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 MRI1Q9BV20 369 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SCNM1Q9BWG6 230 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 TWSG1Q9GZX9 223 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 UBQLN3Q9H347 655 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ZNF768Q9H5H4 540 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 EVA1AQ9H8M9 152 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 ISG20L2Q9H9L3 353 aaKnown RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 C12orf4Q9NQ89 552 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 NPDC1Q9NQX5 325 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 OCIAD1Q9NX40 245 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 LOXL2Q9Y4K0 774 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 RP1P56715 2156 aa10.51□□□□□ -0.73
TSPAN1-201ENST00000372003 LOC105369274A0A096LPK9 316 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 UNC119BA6NIH7 251 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 CPSF4LA6NMK7 179 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 EFCAB7A8K855 629 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 H7BY64 318 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 SOCS6O14544 535 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 TOX3O15405 576 aaPredicted RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 REM1O75628 298 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 RCBTB2O95199 551 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 HMGN2P05204 90 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 ANKRD34CP0C6C1 535 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 FOLR1P15328 257 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 TSFMP43897 325 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 SRP9P49458 86 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 CCR9P51686 369 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 BLVRAP53004 296 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 RAP2BP61225 183 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 MRPS10P82664 201 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 SLC9A5Q14940 896 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 ZIC1Q15915 447 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 EIPR1Q53HC9 387 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 HEPHL1Q6MZM0 1159 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 FAM180BQ6P0A1 224 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 FIGLAQ6QHK4 219 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 C3P1Q6ZMU1 363 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 NLRC3Q7RTR2 1065 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 GDF7Q7Z4P5 450 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 OR4N4Q8N0Y3 316 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 C19orf47Q8N9M1 422 aaKnown RBP10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 BBS1Q8NFJ9 593 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 WBP1Q96G27 269 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 LRFN5Q96NI6 719 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 PRAP1Q96NZ9 151 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 MCHR1Q99705 422 aa10.5□□□□□ -0.73
TSPAN1-201ENST00000372003 UTP23Q9BRU9 249 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms