RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 SPACA9Q96E40 222 aaPredicted RBP4.41□□□□□ -1.7
SGIP1-204ENST00000371039 PELI1Q96FA3 418 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 NEU1Q99519 415 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 ADAT1Q9BUB4 502 aaKnown RBP4.41□□□□□ -1.7
SGIP1-204ENST00000371039 LGR4Q9BXB1 951 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 TTTY10Q9BZA0 68 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 PPA2Q9H2U2 334 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 HMX1Q9NP08 348 aaPredicted RBP4.41□□□□□ -1.7
SGIP1-204ENST00000371039 PRDM7Q9NQW5 492 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 RPS6KB2Q9UBS0 482 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 OPN4Q9UHM6 478 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 CLCA2Q9UQC9 943 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 SLC6A5Q9Y345 797 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 C2orf16Q68DN1 1984 aa4.41□□□□□ -1.7
SGIP1-204ENST00000371039 ALPK2Q86TB3 2170 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 LATS1O95835 1130 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 HIST1H2AGP0C0S8 130 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 CCL5P13501 91 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 HIST1H2ADP20671 130 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ACVR1BP36896 505 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GDNFP39905 211 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GRK6P43250 576 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 PSMD4P55036 377 aaKnown RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 OC90Q02509 493 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ZIC1Q15915 447 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ZNF626Q68DY1 528 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SFRP4Q6FHJ7 346 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GLDNQ6ZMI3 551 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 DPPA2Q7Z7J5 298 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 RTN4RL2Q86UN3 420 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 TRAM1L1Q8N609 369 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 OR5W2Q8NH69 310 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 NANPQ8TBE9 248 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GNPDA2Q8TDQ7 276 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 LIPHQ8WWY8 451 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SLC35A4Q96G79 324 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SCLYQ96I15 445 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ZSWIM3Q96MP5 696 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ZNF285Q96NJ3 590 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 HIST1H2AJQ99878 128 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 CACNG6Q9BXT2 260 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SLC46A2Q9BY10 475 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GSDMCQ9BYG8 508 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SAV1Q9H4B6 383 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 IL21RQ9HBE5 538 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 CHMP1AQ9HD42 196 aaPredicted RBP4.4□□□□□ -1.7
SGIP1-204ENST00000371039 IFT46Q9NQC8 304 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 GSN-AS1Q9NRJ2 163 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 UBQLN2Q9UHD9 624 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 PCDHB10Q9UN67 800 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 SSUH2Q9Y2M2 353 aa4.4□□□□□ -1.7
SGIP1-204ENST00000371039 ANKRD61A6NGH8 418 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 OTOL1A6NHN0 477 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 OGG1O15527 345 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 LDB3O75112 727 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 CXCL14O95715 111 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 CSTAP01040 98 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 HLA-DPB1P04440 258 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 GYPBP06028 91 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 UCHL1P09936 223 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 STAG3L3P0CL85 134 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 EN2P19622 333 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 RPS4Y1P22090 263 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 SERPINA4P29622 427 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 RECQLP46063 649 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 DCDP81605 110 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 C1DQ13901 141 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 TMEM220Q6QAJ8 160 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 PARS2Q7L3T8 475 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 NUDT13Q86X67 352 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 LGALS14Q8TCE9 139 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 C2orf15Q8WU43 125 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 GHSRQ92847 366 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 C4orf36Q96KX1 117 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 FOPNLQ96NB1 174 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 TEAD3Q99594 435 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 NKX3-1Q99801 234 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 TMPRSS13Q9BYE2 586 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 NLNQ9BYT8 704 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 KCNK15Q9H427 330 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 POT1Q9NUX5 634 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 CLDND1Q9NY35 253 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 SEC14L3Q9UDX4 400 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 RCE1Q9Y256 329 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 HRH3Q9Y5N1 445 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 NBEAQ8NFP9 2946 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 A0A1B0GV90 55 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 LRIT2A6NDA9 550 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 TTLL8A6PVC2 850 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 ABCD4O14678 606 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 UBL3O95164 117 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 SRPRAP08240 638 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 MRPL3P09001 348 aaKnown RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 ZNF888P0CJ79 500 aaPredicted RBP4.4□□□□□ -1.71
SGIP1-204ENST00000371039 TEAD1P28347 426 aa4.4□□□□□ -1.71
SGIP1-204ENST00000371039 MAP3K8P41279 467 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms