RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PPA1Q15181 289 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KCNJ8Q15842 424 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 TMEM31Q5JXX7 168 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 FAHD1Q6P587 224 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF836Q6ZNA1 936 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 DPY19L4Q7Z388 723 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 LYSMD2Q8IV50 215 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SNX18Q96RF0 628 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 NIPAL2Q9H841 368 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 MCTS1Q9ULC4 181 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 NSG1A0A0A6YYJ2 146 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC33A1O00400 549 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF593O00488 134 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SLC43A1O75387 559 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 MT-ND4P03905 459 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 ALDOBP05062 364 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 BSGP35613 385 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CSNK1EP49674 416 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PARM1Q6UWI2 310 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 IL20RBQ6UXL0 311 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 RNF165Q6ZSG1 346 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KLHDC8BQ8IXV7 354 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 FRMD1Q8N878 549 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 RHBDD1Q8TEB9 315 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 SEMA4GQ9NTN9 838 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 MYEF2Q9P2K5 600 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 NCDNQ9UBB6 729 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 NXT1Q9UKK6 140 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 CAMK2AQ9UQM7 478 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 PPIL1Q9Y3C6 166 aa10.97□□□□□ -0.65
DEPDC1-201ENST00000370966 STRCP1A6NGW2 1772 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 SCRG1O75711 98 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 NPR2P20594 1047 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 MAKP20794 623 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 CD27P26842 260 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 HOXC8P31273 242 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 AFF3P51826 1226 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 IL13RA1P78552 427 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 SPOCK1Q08629 439 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 CNN3Q15417 329 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 YIF1BQ5BJH7 314 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 OR5M10Q6IEU7 315 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 APOOLQ6UXV4 268 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 NKAIN4Q8IVV8 208 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ZNF683Q8IZ20 524 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 STEAP2Q8NFT2 490 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 PBDC1Q9BVG4 233 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 SHROOM3Q8TF72 1996 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 IGLV3-16A0A075B6K0 115 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 B3GALT4O96024 378 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 KNG1P01042 644 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 IFNA2P01563 188 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 BMP1P13497 986 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ICAM2P13598 275 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 PCBD1P61457 104 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 SQSTM1Q13501 440 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 RBMS2Q15434 407 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ZMAT1Q5H9K5 638 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 MTFR2Q6P444 385 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 OLIG3Q7RTU3 272 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 MRPL21Q7Z2W9 205 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 BCDIN3DQ7Z5W3 292 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ASB12Q8WXK4 309 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 ULBP2Q9BZM5 246 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 FBXO8Q9NRD0 319 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.65
DEPDC1-201ENST00000370966 DOCK1Q14185 1865 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 NCR1O76036 304 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 OR7A10O76100 309 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 RGS19P49795 217 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 TRMT12Q53H54 448 aaKnown RBP10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 CMTM1Q8IZ96 169 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 NPRL2Q8WTW4 380 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 TOMM40LQ969M1 308 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 ZBTB8AQ96BR9 441 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 RGCCQ9H4X1 137 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 CDH20Q9HBT6 801 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 SPHK1Q9NYA1 384 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 KLF15Q9UIH9 416 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 MMP17Q9ULZ9 603 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 TMED7-TICAM2A0A0A6YYA0 188 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 POM121BA6NF01 834 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 A8MVM7 634 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 ETHE1O95571 254 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 MT-ATP6P00846 226 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 SBK2P0C263 348 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 GDNFP39905 211 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 AKR1C2P52895 323 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 B4GALNT1Q00973 533 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 DUSP8Q13202 625 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 SLC22A6Q4U2R8 563 aa10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 PAPD4Q6PIY7 484 aaKnown RBP10.96□□□□□ -0.66
DEPDC1-201ENST00000370966 SPNS2Q8IVW8 549 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms