RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TXNL4AP83876 142 aaKnown RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 GNA13Q14344 377 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 RNF220Q5VTB9 566 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ATG16L1Q676U5 607 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 TMEM225Q6GV28 225 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 NIPAL3Q6P499 406 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 SLC2A7Q6PXP3 512 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 MSRB3Q8IXL7 192 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ANKS4BQ8N8V4 417 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 GLB1L3Q8NCI6 653 aaPredicted RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 GTF2H4Q92759 462 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 KTI12Q96EK9 354 aaPredicted RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 BOD1Q96IK1 185 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 SORCS2Q96PQ0 1159 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 PAIP1Q9H074 479 aaKnown RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 SDR39U1Q9NRG7 319 aaPredicted RBP11.46□□□□□ -0.57
RPF1-201ENST00000370654 PCDHB14Q9Y5E9 798 aa11.46□□□□□ -0.57
RPF1-201ENST00000370654 TRPC5OSA6NMA1 111 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 PNMTP11086 282 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 IDO1P14902 403 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
RPF1-201ENST00000370654 HTR2AP28223 471 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 RPS5P46782 204 aaKnown RBP11.45□□□□□ -0.58
RPF1-201ENST00000370654 POLR2JP52435 117 aaKnown RBP11.45□□□□□ -0.58
RPF1-201ENST00000370654 MAP2K6P52564 334 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 EFNA4P52798 201 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 CRISP3P54108 245 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 DSCR9P59020 149 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 VLDLRP98155 873 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 SRSF2Q01130 221 aaKnown RBP11.45□□□□□ -0.58
RPF1-201ENST00000370654 CHRFAM7AQ494W8 412 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 KIRREL3Q8IZU9 778 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 POMGNT2Q8NAT1 580 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 SLC25A36Q96CQ1 311 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 WFDC6Q9BQY6 131 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 SPATA9Q9BWV2 254 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 SLC25A37Q9NYZ2 338 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 ZIM2Q9NZV7 527 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 SLAMF8Q9P0V8 285 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 B3GAT1Q9P2W7 334 aa11.45□□□□□ -0.58
RPF1-201ENST00000370654 IGKV1D-42A0A075B6H8 117 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 A0A0G2JPF8 293 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 SLC35F4A4IF30 521 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 HNRNPCL2B2RXH8 293 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 HNRNPCL3B7ZW38 293 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 UBDO15205 165 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 HNRNPCL1O60812 293 aaKnown RBP11.44□□□□□ -0.58
RPF1-201ENST00000370654 ZNF432O94892 652 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 ANP32DO95626 131 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 F12P00748 615 aaPredicted RBP11.44□□□□□ -0.58
RPF1-201ENST00000370654 CECR9P0C854 216 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 HNRNPCL4P0DMR1 293 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 UQCRBP14927 111 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 SLC25A16P16260 332 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 NCF2P19878 526 aaPredicted RBP11.44□□□□□ -0.58
RPF1-201ENST00000370654 MAGOHP61326 146 aaKnown RBP11.44□□□□□ -0.58
RPF1-201ENST00000370654 TGFBR3Q03167 851 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 HGFACQ04756 655 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 LRRC74AQ0VAA2 488 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 RGNQ15493 299 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 ADIPOQQ15848 244 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 GLIPR1L2Q4G1C9 344 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 ZNF311Q5JNZ3 666 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 PHYHD1Q5SRE7 291 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 C6orf10Q5SRN2 563 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 PRAMEF8Q5VWM4 474 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 PRAMEF7Q5VXH5 474 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 ANKRD16Q6P6B7 361 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 IL17RELQ6ZVW7 336 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 FUNDC1Q8IVP5 155 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 TAAR8Q969N4 342 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 TLCD1Q96CP7 247 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 ITCHQ96J02 903 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 SLC38A2Q96QD8 506 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 TAPBPLQ9BX59 468 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 TMEM45AQ9NWC5 275 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
RPF1-201ENST00000370654 IGHV4-61A0A0C4DH41 118 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 CLIC1O00299 241 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 TPST1O60507 370 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 KRT33AO76009 404 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 WNT11O96014 354 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 IGFBP1P08833 259 aaPredicted RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 CBLP22681 906 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 CLDN17P56750 224 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 COPZ1P61923 177 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 ARF1P84077 181 aaKnown RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 ROR2Q01974 943 aaKnown RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 NAAAQ02083 359 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 LARS2Q15031 903 aaKnown RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 PODNL1Q6PEZ8 512 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms