RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CREB3L2Q70SY1 520 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 PATL1Q86TB9 770 aaKnown RBP16.68■□□□□ 0.26
CKS1B-203ENST00000368439 P2RY8Q86VZ1 359 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 TGIF2LYQ8IUE0 185 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 EPHX4Q8IUS5 362 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 SLC25A36Q96CQ1 311 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 SLC47A1Q96FL8 570 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 ZNF583Q96ND8 569 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 MUS81Q96NY9 551 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 AMBRA1Q9C0C7 1298 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 TMEM27Q9HBJ8 222 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 TAS2R16Q9NYV7 291 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 ARMCX1Q9P291 453 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 USP22Q9UPT9 525 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 RASD1Q9Y272 281 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 ARID1AO14497 2285 aa16.68■□□□□ 0.26
CKS1B-203ENST00000368439 DPRXA6NFQ7 191 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 FMO6PO60774 539 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 RAD51DO75771 328 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 HOXC12P31275 282 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 CDH12P55289 794 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 ADAM8P78325 824 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 LTBQ06643 244 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 PPA1Q15181 289 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 STK11Q15831 433 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 GABRA6Q16445 453 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 MMEL1Q495T6 779 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 FAM69AQ5T7M9 428 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 ADAM5Q6NVV9 412 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 LINC00114Q6XXX2 140 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 AAED1Q7RTV5 226 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 GPAT4Q86UL3 456 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 TSPYL5Q86VY4 417 aaPredicted RBP16.67■□□□□ 0.26
CKS1B-203ENST00000368439 RBM45Q8IUH3 476 aaKnown RBP16.67■□□□□ 0.26
CKS1B-203ENST00000368439 P3H2Q8IVL5 708 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 OR6T1Q8NGN1 323 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 SH3GL1Q99961 368 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 B3GAT1Q9P2W7 334 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 CAPN7Q9Y6W3 813 aa16.67■□□□□ 0.26
CKS1B-203ENST00000368439 ACANP16112 2415 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 OR2T1O43869 369 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 LYPD3O95274 346 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 THY1P04216 161 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 NCALDP61601 193 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 SWT1Q5T5J6 900 aaKnown RBP16.66■□□□□ 0.26
CKS1B-203ENST00000368439 INTS11Q5TA45 600 aaKnown RBP16.66■□□□□ 0.26
CKS1B-203ENST00000368439 RANBP3LQ86VV4 465 aaPredicted RBP16.66■□□□□ 0.26
CKS1B-203ENST00000368439 KDM8Q8N371 416 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 OR6S1Q8NH40 331 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 PIGTQ969N2 578 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 MCHR1Q99705 422 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 SLCO5A1Q9H2Y9 848 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 ESRP2Q9H6T0 727 aaKnown RBP16.66■□□□□ 0.26
CKS1B-203ENST00000368439 NGBQ9NPG2 151 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 SLC13A4Q9UKG4 626 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 SLC25A15Q9Y619 301 aa16.66■□□□□ 0.26
CKS1B-203ENST00000368439 FLNAP21333 2647 aaKnown RBP16.65■□□□□ 0.26
CKS1B-203ENST00000368439 CIB4A0PJX0 185 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 HS3ST1O14792 307 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 BGLAPP02818 100 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 GRPRP30550 384 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 SELENOPP49908 381 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 BSPH1Q075Z2 132 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 VEZF1Q14119 521 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 ZNF613Q6PF04 617 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 WDR88Q6ZMY6 472 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 SSX8Q7RTT4 187 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 POU5F2Q8N7G0 328 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 ZNF611Q8N823 705 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 WDR31Q8NA23 367 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 PCYOX1LQ8NBM8 494 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 AKAP1Q92667 903 aaKnown RBP eCLIP16.65■□□□□ 0.26
CKS1B-203ENST00000368439 RCN3Q96D15 328 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 MUCL1Q96DR8 90 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 SLC41A3Q96GZ6 507 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 CCL19Q99731 98 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 ECSITQ9BQ95 431 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 TMEM43Q9BTV4 400 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 UPB1Q9UBR1 384 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 RNF115Q9Y4L5 304 aa16.65■□□□□ 0.26
CKS1B-203ENST00000368439 ALPK2Q86TB3 2170 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 CCT8L1PA6NM43 557 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 M0R082 166 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF432O94892 652 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 CD3EP07766 207 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 LGALS3BPQ08380 585 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 FOXD4Q12950 439 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-203ENST00000368439 ENTPD8Q5MY95 495 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 C9orf135Q5VTT2 229 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 OR7E24Q6IFN5 339 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 LINGO2Q7L985 606 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 LRRC75A-AS1Q8N1F1 130 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 POMGNT2Q8NAT1 580 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 ADPRHL1Q8NDY3 354 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 C1orf162Q8NEQ5 155 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-203ENST00000368439 WFDC11Q8NEX6 87 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 RP9Q8TA86 221 aaKnown RBP16.64■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF417Q8TAU3 575 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms