RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 VWC2LB2RUY7 222 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM229AB2RXF0 380 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 HNRNPCL3B7ZW38 293 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 SLCO1B7G3V0H7 640 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 LY6HO94772 140 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 HNRNPCL4P0DMR1 293 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 IGHV4-31P0DP07 118 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 USF1P22415 310 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 CRATP43155 626 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 SELENOPP49908 381 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 LSM11P83369 360 aaKnown RBP eCLIP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 LGALS3BPQ08380 585 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 LARS2Q15031 903 aaKnown RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 TBRG1Q3YBR2 411 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 C1orf140Q5VVS0 124 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 CYB5R2Q6BCY4 276 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 MSANTD1Q6ZTZ1 278 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 LINGO2Q7L985 606 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 ANKRD42Q8N9B4 389 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 STK35Q8TDR2 534 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM158Q8WZ71 300 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 BCL2L2Q92843 193 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 C3orf49Q96BT1 292 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 FBXO17Q96EF6 278 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM19Q96HH6 336 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF317Q96PQ6 595 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 SLC38A2Q96QD8 506 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 KATNB1Q9BVA0 655 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 SDR39U1Q9NRG7 319 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 THUMPD1Q9NXG2 353 aaKnown RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 ZIM2Q9NZV7 527 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 CRNNQ9UBG3 495 aaPredicted RBP13.96□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF232Q9UNY5 417 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 RASD1Q9Y272 281 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 STAB1Q9NY15 2570 aa13.96□□□□□ -0.17
CKS1B-202ENST00000368436 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 ARPC4-TTLL3A0A0A6YYG9 625 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 FTCDNL1E5RQL4 147 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF587BE7ETH6 402 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 KRT33AO76009 404 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 ANP32DO95626 131 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 LGI1O95970 557 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 KITP10721 976 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 C3orf36Q3SXR2 165 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 RPS26P11Q5JNZ5 115 aaPredicted RBP13.95□□□□□ -0.18
CKS1B-202ENST00000368436 PRAMEF8Q5VWM4 474 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 PRAMEF7Q5VXH5 474 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 SERPINA11Q86U17 422 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 MFSD8Q8NHS3 518 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 SLC35B4Q969S0 331 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 VPS33AQ96AX1 596 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 ITCHQ96J02 903 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 LINC00470Q9BZP3 86 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 NELFAQ9H3P2 528 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 RMND5AQ9H871 391 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 BCL2L10Q9HD36 194 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 LPAR3Q9UBY5 353 aa13.95□□□□□ -0.18
CKS1B-202ENST00000368436 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 NDUFS8O00217 210 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 PHF1O43189 567 aaPredicted RBP13.94□□□□□ -0.18
CKS1B-202ENST00000368436 FZD7O75084 574 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 UPK3AO75631 287 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 HOXB1P14653 301 aaPredicted RBP13.94□□□□□ -0.18
CKS1B-202ENST00000368436 NCF2P19878 526 aaPredicted RBP13.94□□□□□ -0.18
CKS1B-202ENST00000368436 SERPINF1P36955 418 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 PDLIM4P50479 330 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 SLC18A1P54219 525 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 UBE2NP61088 152 aaKnown RBP13.94□□□□□ -0.18
CKS1B-202ENST00000368436 SNRPD2P62316 118 aaKnown RBP13.94□□□□□ -0.18
CKS1B-202ENST00000368436 EGR4Q05215 589 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 GTDC1Q4AE62 458 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 SLC9B1Q4ZJI4 515 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 ATG16L1Q676U5 607 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 NXNQ6DKJ4 435 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 NIPAL3Q6P499 406 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 ANKRD16Q6P6B7 361 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 FAM169BQ8N8A8 192 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 SORCS2Q96PQ0 1159 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 PTDSS2Q9BVG9 487 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 BEX2Q9BXY8 128 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 ARMC7Q9H6L4 198 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 CA10Q9NS85 328 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 IFT52Q9Y366 437 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 FKBP7Q9Y680 259 aa13.94□□□□□ -0.18
CKS1B-202ENST00000368436 TMEM247A6NEH6 219 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 B9A039 149 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 RPL36A-HNRNPH2H7BZ11 118 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 NR5A2O00482 541 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 PDE5AO76074 875 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF432O94892 652 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 AHSA1O95433 338 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 IGLV1-44P01699 117 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 CRYAAP02489 173 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 PNMTP11086 282 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 BMP2P12643 396 aa13.93□□□□□ -0.18
CKS1B-202ENST00000368436 ZNF16P17020 682 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms