RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 MT-ND2P03891 347 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 HIST1H2ABP04908 130 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 ZNF17P17021 662 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 DCKP27707 260 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 SLC9A3P48764 834 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 PCYT1AP49585 367 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 TMBIM6P55061 237 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 GLYR1Q49A26 553 aaPredicted RBP14.35□□□□□ -0.11
LMNA-203ENST00000368297 CLEC12AQ5QGZ9 265 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 TMEM201Q5SNT2 666 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 GPR107Q5VW38 600 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 RPL13AP3Q6NVV1 102 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 HIST3H2AQ7L7L0 130 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 IQCF1Q8N6M8 205 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 CLDN22Q8N7P3 220 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 FAM83FQ8NEG4 500 aaPredicted RBP14.35□□□□□ -0.11
LMNA-203ENST00000368297 OR52L1Q8NGH7 329 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 GGHQ92820 318 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 HIST1H2ACQ93077 130 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 ISOC1Q96CN7 298 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 SAMD8Q96LT4 415 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 MOGAT1Q96PD6 335 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 TNFRSF13CQ96RJ3 184 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 UBL7Q96S82 380 aaPredicted RBP14.35□□□□□ -0.11
LMNA-203ENST00000368297 PLA2G12AQ9BZM1 189 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 OR52D1Q9H346 318 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 UBQLN3Q9H347 655 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 FKBP14Q9NWM8 211 aa14.35□□□□□ -0.11
LMNA-203ENST00000368297 RPL36Q9Y3U8 105 aaKnown RBP14.35□□□□□ -0.11
LMNA-203ENST00000368297 APC2O95996 2303 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 OR2T1O43869 369 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 NPIPB7O75200 414 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 BGLAPP02818 100 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 OPN1LWP04000 364 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 CDK1P06493 297 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 BMP7P18075 431 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 IDUAP35475 653 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 CXADRP78310 365 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 LTBQ06643 244 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 OCLNQ16625 522 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 TBR1Q16650 682 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 TMEM44Q2T9K0 475 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 SYT14P1Q58G82 188 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 WIPI1Q5MNZ9 446 aaPredicted RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 SLC25A30Q5SVS4 291 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 FAM69AQ5T7M9 428 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 GTF2IRD2BQ6EKJ0 949 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 SMARCD3Q6STE5 483 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 MAMDC2Q7Z304 686 aaPredicted RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 GTF2IRD2Q86UP8 949 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 FAM26EQ8N5C1 309 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 TCEANCQ8N8B7 351 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 FAM98AQ8NCA5 519 aaKnown RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 OR8D4Q8NGM9 314 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 SLC25A43Q8WUT9 341 aaPredicted RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 FAR1Q8WVX9 515 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 ZCCHC14Q8WYQ9 949 aaKnown RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 SMPDL3BQ92485 455 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 SFXN2Q96NB2 322 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 IL4I1Q96RQ9 567 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 OR2B2Q9GZK3 357 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 ZNF703Q9H7S9 590 aaPredicted RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 FKRPQ9H9S5 495 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 IL20Q9NYY1 176 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 WARS2Q9UGM6 360 aaKnown RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 IL20RAQ9UHF4 553 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 SIGLEC7Q9Y286 467 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 MRPS18CQ9Y3D5 142 aaKnown RBP14.34□□□□□ -0.11
LMNA-203ENST00000368297 NCKAP5O14513 1909 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 MPDZO75970 2070 aa14.34□□□□□ -0.11
LMNA-203ENST00000368297 MED19A0JLT2 244 aaPredicted RBP14.33□□□□□ -0.11
LMNA-203ENST00000368297 PTP4A3O75365 173 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 PAX7P23759 505 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 GTF2E2P29084 291 aaKnown RBP14.33□□□□□ -0.11
LMNA-203ENST00000368297 SFTPDP35247 375 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 CD97P48960 835 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 NUDT6P53370 316 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 PPIAP62937 165 aaKnown RBP14.33□□□□□ -0.11
LMNA-203ENST00000368297 SNAPC1Q16533 368 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 NANOGNBQ7Z5D8 188 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 TMEM251Q8N6I4 163 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 C9orf43Q8TAL5 461 aaPredicted RBP14.33□□□□□ -0.11
LMNA-203ENST00000368297 ARL5BQ96KC2 179 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 PTDSS2Q9BVG9 487 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 TAPBPLQ9BX59 468 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 POTEKPQ9BYX7 375 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 AMBNQ9NP70 447 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 ACOT13Q9NPJ3 140 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 ZNF229Q9UJW7 825 aa14.33□□□□□ -0.11
LMNA-203ENST00000368297 TNRC6AQ8NDV7 1962 aaKnown RBP14.33□□□□□ -0.12
LMNA-203ENST00000368297 BLOC1S5-TXNDC5H3BN57 136 aa14.33□□□□□ -0.12
LMNA-203ENST00000368297 M0R129 80 aa14.33□□□□□ -0.12
LMNA-203ENST00000368297 ACOT7O00154 380 aa14.33□□□□□ -0.12
LMNA-203ENST00000368297 FADS2O95864 444 aaKnown RBP14.33□□□□□ -0.12
LMNA-203ENST00000368297 MT-ATP6P00846 226 aa14.33□□□□□ -0.12
LMNA-203ENST00000368297 HMGN1P05114 100 aa14.33□□□□□ -0.12
LMNA-203ENST00000368297 PIPP12273 146 aaPredicted RBP14.33□□□□□ -0.12
LMNA-203ENST00000368297 FKBP2P26885 142 aaKnown RBP14.33□□□□□ -0.12
LMNA-203ENST00000368297 MAGEA5P43359 124 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms