RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 AKAP10O43572 662 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 UGT2B17O75795 530 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PPIAL4FP0DN26 164 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PGM1P36871 562 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 RAD52P43351 418 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PKNOX1P55347 436 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 CCL8P80075 99 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 ARF1P84077 181 aaKnown RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 ROR2Q01974 943 aaKnown RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 LCP2Q13094 533 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 CALCOCO2Q13137 446 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 KIAA0040Q15053 153 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 GPR68Q15743 365 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 TAF9Q16594 264 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 ALKBH6Q3KRA9 238 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 OLIG3Q7RTU3 272 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 GPAT4Q86UL3 456 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 FAM110DQ8TAY7 271 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 MMP26Q9NRE1 261 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 LEF1Q9UJU2 399 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PURGQ9UJV8 347 aaKnown RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 NUP214P35658 2090 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-202ENST00000367740 TANC2Q9HCD6 1990 aa12.45□□□□□ -0.42
VAMP4-202ENST00000367740 CLPSL1A2RUU4 121 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 AQP7P3A6NL99 342 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 TRAF3IP2O43734 574 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-202ENST00000367740 AKR7A3O95154 331 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 GPANK1O95872 356 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 NGFP01138 241 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF35P13682 527 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 SELEP16581 610 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 RYKP34925 604 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 CRYBB2P43320 205 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 MAGEA4P43358 317 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 PLAURQ03405 335 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 TP53BP2Q13625 1128 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 FXNQ16595 210 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 EIF3MQ7L2H7 374 aaKnown RBP12.44□□□□□ -0.42
VAMP4-202ENST00000367740 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 JAZF1Q86VZ6 243 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 OR5D16Q8NGK9 328 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 PIF1Q9H611 641 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 C1RLQ9NZP8 487 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF346Q9UL40 294 aaKnown RBP12.44□□□□□ -0.42
VAMP4-202ENST00000367740 AUP1Q9Y679 476 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 CACNG2Q9Y698 323 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
VAMP4-202ENST00000367740 TMED7-TICAM2A0A0A6YYA0 188 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 IGHV1-69-2A0A0G2JMI3 117 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 MDFIC2A0A1B0GVS7 189 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 A0A1W2PPW3 197 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 CLDN25C9JDP6 229 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF208O43345 1280 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 HOXA3O43365 443 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-202ENST00000367740 FCMRO60667 390 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 SEC14L2O76054 403 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 NDUFA7O95182 113 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 SDC1P18827 310 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 P2RY4P51582 365 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF154Q13106 437 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 MAPK14Q16539 360 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 MMEL1Q495T6 779 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 NIPAL3Q6P499 406 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 SYT10Q6XYQ8 523 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 CREB3L2Q70SY1 520 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 REC114Q7Z4M0 266 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 GLB1L3Q8NCI6 653 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-202ENST00000367740 CLHC1Q8NHS4 586 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 MRAPQ8TCY5 172 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-202ENST00000367740 TSSK3Q96PN8 268 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 OR7D2Q96RA2 312 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 LINC00470Q9BZP3 86 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 MS4A7Q9GZW8 240 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-202ENST00000367740 FAF1Q9UNN5 650 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-202ENST00000367740 STK38LQ9Y2H1 464 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 TMED7Q9Y3B3 224 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 CCL27Q9Y4X3 112 aa12.43□□□□□ -0.42
VAMP4-202ENST00000367740 LOC100653049A0A140TA62 436 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 LIPT2A6NK58 231 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 C17orf100A8MU93 164 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 RPL36A-HNRNPH2H7BZ11 118 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 CCDC188H7C350 402 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 KRT34O76011 436 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 KRT16P08779 473 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 IGHV4-38-2P0DP08 117 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF14P17017 642 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 CAPZA2P47755 286 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 MTNR1AP48039 350 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 CCT3P49368 545 aaKnown RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 HLXQ14774 488 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 GLIPR1L2Q4G1C9 344 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms