RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 MED12Q93074 2177 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 A0A087WZY1 265 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TMED7-TICAM2A0A0A6YYA0 188 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TRBV4-1A0A0J9YWV2 114 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ZC3H12DA2A288 527 aaKnown RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OR2M5A3KFT3 312 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 C7orf72A4D263 438 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TRAPPC13A5PLN9 417 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 EEF1E1-BLOC1S5C9J1V9 151 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 H0YC42 278 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 H3BML4 177 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 KPNA4O00629 521 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 EEF1E1O43324 174 aaKnown RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 CHP2O43745 196 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 CST1P01037 141 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OPN1LWP04000 364 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 PEPDP12955 493 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 UQCRBP14927 111 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ZNF17P17021 662 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ITGA2P17301 1181 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 RHCEP18577 417 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 LIMS1P48059 325 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 STARP49675 285 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 POLR2HP52434 150 aaKnown RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 UGT2B15P54855 530 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TPD52P55327 224 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 GFRA1P56159 465 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 COPZ1P61923 177 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 KRTAP1-1Q07627 177 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 RCN1Q15293 331 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 SEC23BQ15437 767 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 EXOC3L2Q2M3D2 409 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 SLC25A53Q5H9E4 307 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OR2T5Q6IEZ7 315 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ZNF613Q6PF04 617 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TBPL2Q6SJ96 375 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 AMIGO2Q86SJ2 522 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 MEX3DQ86XN8 651 aaKnown RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ADGRG3Q86Y34 549 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 KIF18BQ86Y91 864 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 EPHX4Q8IUS5 362 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 HS3ST5Q8IZT8 346 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 GTPBP8Q8N3Z3 284 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 PIK3C3Q8NEB9 887 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OR4C15Q8NGM1 316 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OR2T29Q8NH02 315 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 PFN4Q8NHR9 129 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 RNF217Q8TC41 542 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ST8SIA1Q92185 356 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 SMPDL3BQ92485 455 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 STMN2Q93045 179 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ABTB1Q969K4 478 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ZBTB8AQ96BR9 441 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 MRGPRX4Q96LA9 322 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 SFXN2Q96NB2 322 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 FUZQ9BT04 418 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 FNDC11Q9BVV2 318 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TRIM2Q9C040 744 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 OR11A1Q9GZK7 315 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 ADAM19Q9H013 955 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 SEMA6AQ9H2E6 1030 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 NMNAT1Q9HAN9 279 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 NTN4Q9HB63 628 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TMEM27Q9HBJ8 222 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 RPS6KB2Q9UBS0 482 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 RIMS3Q9UJD0 308 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
MRPL55-211ENST00000366738 TMED7Q9Y3B3 224 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 LYVE1Q9Y5Y7 322 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 U3KQV3 271 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 MEGF8Q7Z7M0 2845 aa7.3□□□□□ -1.24
MRPL55-211ENST00000366738 A0A087WUJ7 227 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ELOA3DA6NLF2 546 aaPredicted RBP7.29□□□□□ -1.24
MRPL55-211ENST00000366738 H0YHG0 523 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 GADD45GO95257 159 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 IL2RAP01589 272 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 H1F0P07305 194 aaKnown RBP7.29□□□□□ -1.24
MRPL55-211ENST00000366738 CPN1P15169 458 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 CTSSP25774 331 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ELK4P28324 431 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 SFTPDP35247 375 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 LHX2P50458 406 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 SORDQ00796 357 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 EGR4Q05215 589 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ST3GAL3Q11203 375 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 SELENBP1Q13228 472 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ATP6AP1Q15904 470 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ELOA3BQ3SY89 546 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 FGD3Q5JSP0 725 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ANKRD34AQ69YU3 496 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 C3orf33Q6P1S2 294 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ZFP1Q6P2D0 407 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 PODNL1Q6PEZ8 512 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ULK3Q6PHR2 472 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 GGNQ86UU5 652 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 CYP4Z1Q86W10 505 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 PM20D2Q8IYS1 436 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ATP6V1C2Q8NEY4 427 aa7.29□□□□□ -1.24
MRPL55-211ENST00000366738 ELOA3Q8NG57 546 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms