RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PCDHGB5Q9Y5G0 923 aa7.02□□□□□ -1.29
YBX3-204ENST00000366290 PHF3Q92576 2039 aaKnown RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 A0A1W2PRB8 838 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 PGPEP1LA6NFU8 196 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 UPK1AO00322 258 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 FAM107AO95990 144 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 NCF2P19878 526 aaPredicted RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 CHMP24386 653 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 S100A3P33764 101 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 MPIP34949 423 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CDKN2CP42773 168 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 EMDP50402 254 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 POLR2JP52435 117 aaKnown RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 STX1BP61266 288 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 IRX1P78414 480 aaPredicted RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 RBPJQ06330 500 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 HSPB3Q12988 150 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 NTRK2Q16620 822 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 SRSF7Q16629 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
YBX3-204ENST00000366290 AGKQ53H12 422 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CMPK2Q5EBM0 449 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 ASPHD1Q5U4P2 390 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 TMEM107Q6UX40 140 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CPLX4Q7Z7G2 160 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 TAGAPQ8N103 731 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 OR2L13Q8N349 312 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 NATD1Q8N6N6 113 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 OR2M7Q8NG81 312 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 OR52R1Q8NGF1 315 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 GOT1L1Q8NHS2 421 aaPredicted RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 TMEM170AQ8WVE7 144 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 OR5P2Q8WZ92 322 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 VPS33AQ96AX1 596 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 FAM120BQ96EK7 910 aaKnown RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 GIMAP5Q96F15 307 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 VSTM2LQ96N03 204 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CCDC115Q96NT0 180 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 SECISBP2Q96T21 854 aaKnown RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 FAM173AQ9BQD7 235 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 SLC6A13Q9NSD5 602 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 ATAD3AQ9NVI7 634 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 FAM120CQ9NX05 1096 aaKnown RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 CCDC167Q9P0B6 97 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 BTNL2Q9UIR0 455 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CFL2Q9Y281 166 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 CHCHD2Q9Y6H1 151 aaPredicted RBP7.01□□□□□ -1.29
YBX3-204ENST00000366290 MED12Q93074 2177 aa7.01□□□□□ -1.29
YBX3-204ENST00000366290 NCKAP5O14513 1909 aa7□□□□□ -1.29
YBX3-204ENST00000366290 A0A0G2JMM0 328 aa7□□□□□ -1.29
YBX3-204ENST00000366290 PRSS51A0A1B0GVH4 220 aa7□□□□□ -1.29
YBX3-204ENST00000366290 C2orf92A0A1B0GVN3 265 aa7□□□□□ -1.29
YBX3-204ENST00000366290 A0A1W2PPB8 328 aa7□□□□□ -1.29
YBX3-204ENST00000366290 A0A1W2PRS3 328 aa7□□□□□ -1.29
YBX3-204ENST00000366290 PINLYPA6NC86 204 aa7□□□□□ -1.29
YBX3-204ENST00000366290 A6NNC1 897 aa7□□□□□ -1.29
YBX3-204ENST00000366290 KIR3DP1A8MWS1 328 aa7□□□□□ -1.29
YBX3-204ENST00000366290 NPIPA5E9PKD4 350 aa7□□□□□ -1.29
YBX3-204ENST00000366290 NR5A2O00482 541 aa7□□□□□ -1.29
YBX3-204ENST00000366290 TFECO14948 347 aaPredicted RBP7□□□□□ -1.29
YBX3-204ENST00000366290 IGHG3P01860 377 aa7□□□□□ -1.29
YBX3-204ENST00000366290 IL6P05231 212 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CLEC3BP05452 202 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CCL3P10147 92 aa7□□□□□ -1.29
YBX3-204ENST00000366290 NAGAP17050 411 aa7□□□□□ -1.29
YBX3-204ENST00000366290 DDX5P17844 614 aaKnown RBP7□□□□□ -1.29
YBX3-204ENST00000366290 AGAP20933 346 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CNR1P21554 472 aa7□□□□□ -1.29
YBX3-204ENST00000366290 POU1F1P28069 291 aa7□□□□□ -1.29
YBX3-204ENST00000366290 MAP3K8P41279 467 aa7□□□□□ -1.29
YBX3-204ENST00000366290 PSPHP78330 225 aa7□□□□□ -1.29
YBX3-204ENST00000366290 GTDC1Q4AE62 458 aa7□□□□□ -1.29
YBX3-204ENST00000366290 VPS26BQ4G0F5 336 aa7□□□□□ -1.29
YBX3-204ENST00000366290 PAGE3Q5JUK9 113 aa7□□□□□ -1.29
YBX3-204ENST00000366290 C10orf25Q5T742 122 aa7□□□□□ -1.29
YBX3-204ENST00000366290 SLC22A10Q63ZE4 541 aa7□□□□□ -1.29
YBX3-204ENST00000366290 KRTAP5-3Q6L8H2 238 aa7□□□□□ -1.29
YBX3-204ENST00000366290 NPSR1Q6W5P4 371 aa7□□□□□ -1.29
YBX3-204ENST00000366290 MSANTD1Q6ZTZ1 278 aa7□□□□□ -1.29
YBX3-204ENST00000366290 SERPINA11Q86U17 422 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CLEC4FQ8N1N0 589 aa7□□□□□ -1.29
YBX3-204ENST00000366290 FBXW8Q8N3Y1 598 aa7□□□□□ -1.29
YBX3-204ENST00000366290 GTF2H4Q92759 462 aa7□□□□□ -1.29
YBX3-204ENST00000366290 SPDL1Q96EA4 605 aa7□□□□□ -1.29
YBX3-204ENST00000366290 OR52E6Q96RD3 313 aa7□□□□□ -1.29
YBX3-204ENST00000366290 ZBTB18Q99592 522 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CCDC106Q9BWC9 280 aa7□□□□□ -1.29
YBX3-204ENST00000366290 TTTY12Q9BZ98 90 aa7□□□□□ -1.29
YBX3-204ENST00000366290 IL1RL2Q9HB29 575 aa7□□□□□ -1.29
YBX3-204ENST00000366290 PROK2Q9HC23 129 aa7□□□□□ -1.29
YBX3-204ENST00000366290 TAS2R9Q9NYW1 312 aa7□□□□□ -1.29
YBX3-204ENST00000366290 CNIH4Q9P003 139 aa7□□□□□ -1.29
YBX3-204ENST00000366290 ARMCX1Q9P291 453 aa7□□□□□ -1.29
YBX3-204ENST00000366290 NPIPA1Q9UND3 350 aa7□□□□□ -1.29
YBX3-204ENST00000366290 HEATR5AQ86XA9 2040 aa7□□□□□ -1.29
YBX3-204ENST00000366290 DCHS2Q6V1P9 2916 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 POLQO75417 2590 aa6.99□□□□□ -1.29
YBX3-204ENST00000366290 A0A1W2PP18 115 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms