RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 TRABD2BA6NFA1 517 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 P2RX6O15547 441 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 TMEM127O75204 238 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ITGA10O75578 1167 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 RAF1P04049 648 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 GIMD1P0DJR0 217 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MAZP56270 477 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 ACTA2P62736 377 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ACTG2P63267 376 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 DGCR2P98153 550 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FHL1Q13642 323 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 PRICKLE4Q2TBC4 344 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FAM209AQ5JX71 171 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 FCRLBQ6BAA4 426 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FCRL6Q6DN72 434 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SIGIRRQ6IA17 410 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 RPL22L1Q6P5R6 122 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 FIGNL1Q6PIW4 674 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 LINC00114Q6XXX2 140 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 KANSL1Q7Z3B3 1105 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SLITRK4Q8IW52 837 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 POMGNT2Q8NAT1 580 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ZNF680Q8NEM1 530 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 SMIM19Q96E16 107 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ZFP3Q96NJ6 502 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 DUSP23Q9BVJ7 150 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 TRIM2Q9C040 744 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MCCC2Q9HCC0 563 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FLRT3Q9NZU0 649 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 EMC3Q9P0I2 261 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FBXL4Q9UKA2 621 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 NPIPA5A0A0B4J1W7 369 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 A0A1B0GWA3 101 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 NPIPA7E9PJI5 369 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 CYR61O00622 381 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 SHOXO15266 292 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ZNF749O43361 778 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 NKX2-2O95096 273 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 NPIPA8P0DM63 369 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SNRPBP14678 240 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 GDI2P50395 445 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 ID2Q02363 134 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 PLAURQ03405 335 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 CAMK2DQ13557 499 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 KLF9Q13886 244 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 GGTLC2Q14390 218 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 CDK5R1Q15078 307 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 CDONQ4KMG0 1287 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 C14orf28Q4W4Y0 310 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MANEAQ5SRI9 462 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 FGD2Q7Z6J4 655 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 LSMEM1Q8N8F7 131 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 OR56B4Q8NH76 319 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 SMAP2Q8WU79 429 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 CNOT9Q92600 299 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 CTHRC1Q96CG8 243 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 PEX11GQ96HA9 241 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 UCK1Q9HA47 277 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MAT2BQ9NZL9 334 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 GMEB2Q9UKD1 530 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 MRPS7Q9Y2R9 242 aaKnown RBP11.37□□□□□ -0.59
UBA3-202ENST00000361055 AUP1Q9Y679 476 aa11.37□□□□□ -0.59
UBA3-202ENST00000361055 ARID1BQ8NFD5 2236 aaPredicted RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 A0A1W2PRG6 482 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 GXYLT2A0PJZ3 443 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 GPR171O14626 319 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 FGF17O60258 216 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 TYRP1P17643 537 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 M6PRP20645 277 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 ACAA2P42765 397 aaKnown RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 RPS11P62280 158 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBA3-202ENST00000361055 DBPQ10586 325 aaPredicted RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 TCF15Q12870 199 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 RFPL4BQ6ZWI9 263 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 BMPERQ8N8U9 685 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 FAM98AQ8NCA5 519 aaKnown RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 OR11H4Q8NGC9 324 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 OR4D9Q8NGE8 314 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 OR52E2Q8NGJ4 325 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 RSC1A1Q92681 617 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 MRPL48Q96GC5 212 aaKnown RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 ERMAPQ96PL5 475 aaPredicted RBP11.36□□□□□ -0.59
UBA3-202ENST00000361055 HEXA-AS1Q9H8Q6 139 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 NRIP3Q9NQ35 241 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 CHRNA9Q9UGM1 479 aa11.36□□□□□ -0.59
UBA3-202ENST00000361055 LOC105369274A0A096LPK9 316 aa11.35□□□□□ -0.59
UBA3-202ENST00000361055 GPRIN2O60269 458 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms