RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SRP9P49458 86 aaKnown RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 DAPP51397 102 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 SSX9Q7RTT3 188 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 FAM173AQ9BQD7 235 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 CENPOQ9BU64 300 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 ULBP3Q9BZM4 244 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 C10orf71Q711Q0 1435 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TCRBV3S1A0A5B6 114 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 CDHR4A6H8M9 788 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TMEM235A6NFC5 223 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 SMAD6O43541 496 aaKnown RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 GLSO94925 669 aaPredicted RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 PFKMP08237 780 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 NR0B2Q15466 257 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 ARHGAP11BQ3KRB8 267 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 NECAP1Q8NC96 275 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TSSK2Q96PF2 358 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 CLMPQ9H6B4 373 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 LIN7BQ9HAP6 207 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TMEM72A0PK05 275 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 TACR3P29371 465 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 MZT1Q08AG7 82 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 C1orf220Q5T0J3 134 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 NT5DC2Q9H857 520 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 RD3LP0DJH9 198 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 RPL11P62913 178 aaKnown RBP14.93□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF33BQ06732 778 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.93□□□□□ -0.022e-7■■■□□ 14.8
COL18A1-203ENST00000359759 C20orf85Q9H1P6 137 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 NKX2-4Q9H2Z4 354 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 SEMA4GQ9NTN9 838 aa14.93□□□□□ -0.02
COL18A1-203ENST00000359759 SEC14L6B5MCN3 397 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 GABRA5P31644 462 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PHLDA2Q53GA4 152 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 NPSR1Q6W5P4 371 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CBLL1Q75N03 491 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 C14orf79Q96F83 325 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 EGLN2Q96KS0 407 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 LMF2Q9BU23 707 aaKnown RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 WNT7BP56706 349 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CYS1Q717R9 158 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PRICKLE2Q7Z3G6 844 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CLEC1AQ8NC01 280 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CASD1Q96PB1 797 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PKMYT1Q99640 499 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PLK3Q9H4B4 646 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 ANKRD19PQ9H560 264 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 HSFX1Q9UBD0 423 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CSO75390 466 aaKnown RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 MMP2P08253 660 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 AADACP22760 399 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 IVDP26440 423 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 IMPA1P29218 277 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 TRHRP34981 398 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF91Q05481 1191 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 ACSM1Q08AH1 577 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PDE7AQ13946 482 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 CTSL3PQ5NE16 218 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 SLC16A14Q7RTX9 510 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 PIANPQ8IYJ0 282 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 TCEAL8Q8IYN2 117 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 INPP5EQ9NRR6 644 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 STEAP1Q9UHE8 339 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 MRPS28Q9Y2Q9 187 aaKnown RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 P2RY10O00398 339 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 ELLP55199 621 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 SIAH3Q8IW03 269 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 ERVMER34-1Q9H9K5 563 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 HCFC1R1Q9NWW0 138 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 THBS1P07996 1170 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 DHRS4L1P0CG22 281 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 HTR2CP28335 458 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 BLVRBP30043 206 aaPredicted RBP14.92□□□□□ -0.02
COL18A1-203ENST00000359759 HTR3AP46098 478 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 GPLD1P80108 840 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 SLC5A12Q1EHB4 618 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 LINC00346Q8IVM7 164 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 OR13C9Q8NGT0 318 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 RHBDD1Q8TEB9 315 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 VRTNQ9H8Y1 702 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 GHRLQ9UBU3 117 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 SLC45A1Q9Y2W3 748 aa14.92□□□□□ -0.02
COL18A1-203ENST00000359759 MYH11P35749 1972 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 KRBOX1C9JBD0 128 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 MCRIP1C9JLW8 97 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 CCSO14618 274 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 MMP12P39900 470 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 HBA1P69905 142 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 CAMK2BQ13554 666 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 IRF4Q15306 451 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 FCN2Q15485 313 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 OR1S2Q8NGQ3 325 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 ASB17Q8WXJ9 295 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 FAM3CQ92520 227 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 RBPMSQ93062 196 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 GMPR2Q9P2T1 348 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 V9GYS6 101 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 MYADML2A6NDP7 307 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 SLC1A3P43003 542 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms