RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 RASGEF1AQ8N9B8 481 aa6.89□□□□□ -1.31
APP-206ENST00000359726 BOLLQ8N9W6 283 aaKnown RBP6.89□□□□□ -1.31
APP-206ENST00000359726 CLEC1AQ8NC01 280 aa6.89□□□□□ -1.31
APP-206ENST00000359726 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
APP-206ENST00000359726 PIGXQ8TBF5 258 aa6.89□□□□□ -1.31
APP-206ENST00000359726 PIK3IP1Q96FE7 263 aa6.89□□□□□ -1.31
APP-206ENST00000359726 MED8Q96G25 268 aa6.89□□□□□ -1.31
APP-206ENST00000359726 VRK1Q99986 396 aaPredicted RBP6.89□□□□□ -1.31
APP-206ENST00000359726 LAT2Q9GZY6 243 aa6.89□□□□□ -1.31
APP-206ENST00000359726 GLIPR2Q9H4G4 154 aa6.89□□□□□ -1.31
APP-206ENST00000359726 NCDNQ9UBB6 729 aa6.89□□□□□ -1.31
APP-206ENST00000359726 FBXL4Q9UKA2 621 aa6.89□□□□□ -1.31
APP-206ENST00000359726 YBX2Q9Y2T7 364 aaKnown RBP6.89□□□□□ -1.31
APP-206ENST00000359726 A0A0A6YYC8 382 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 A0A1W2PPK0 400 aa6.88□□□□□ -1.31
APP-206ENST00000359726 PRR32B1ATL7 298 aa6.88□□□□□ -1.31
APP-206ENST00000359726 I3L1I5 382 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 COCHO43405 550 aa6.88□□□□□ -1.31
APP-206ENST00000359726 FRS3O43559 492 aa6.88□□□□□ -1.31
APP-206ENST00000359726 LILRB5O75023 590 aa6.88□□□□□ -1.31
APP-206ENST00000359726 C1orf105O95561 183 aa6.88□□□□□ -1.31
APP-206ENST00000359726 FCGR3AP08637 254 aa6.88□□□□□ -1.31
APP-206ENST00000359726 APEHP13798 732 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 GJA5P36382 358 aa6.88□□□□□ -1.31
APP-206ENST00000359726 IFNGR2P38484 337 aa6.88□□□□□ -1.31
APP-206ENST00000359726 SLC6A9P48067 706 aa6.88□□□□□ -1.31
APP-206ENST00000359726 F2RL1P55085 397 aa6.88□□□□□ -1.31
APP-206ENST00000359726 GMFBP60983 142 aa6.88□□□□□ -1.31
APP-206ENST00000359726 RAB5BP61020 215 aa6.88□□□□□ -1.31
APP-206ENST00000359726 NAAAQ02083 359 aa6.88□□□□□ -1.31
APP-206ENST00000359726 DUSP2Q05923 314 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ILF3Q12906 894 aaKnown RBP eCLIP6.88□□□□□ -1.31
APP-206ENST00000359726 PEA15Q15121 130 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ZNF239Q16600 458 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 ATPAF1Q5TC12 328 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 NKAIN2Q5VXU1 208 aa6.88□□□□□ -1.31
APP-206ENST00000359726 NXPE4Q6UWF7 544 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ACOT7LQ6ZUV0 252 aa6.88□□□□□ -1.31
APP-206ENST00000359726 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
APP-206ENST00000359726 OR2L13Q8N349 312 aa6.88□□□□□ -1.31
APP-206ENST00000359726 SYNPRQ8TBG9 265 aa6.88□□□□□ -1.31
APP-206ENST00000359726 SMIM8Q96KF7 97 aa6.88□□□□□ -1.31
APP-206ENST00000359726 CLCC1Q96S66 551 aa6.88□□□□□ -1.31
APP-206ENST00000359726 EFCAB11Q9BUY7 163 aa6.88□□□□□ -1.31
APP-206ENST00000359726 KLF16Q9BXK1 252 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 KLHL1Q9NR64 748 aa6.88□□□□□ -1.31
APP-206ENST00000359726 C5AR2Q9P296 337 aa6.88□□□□□ -1.31
APP-206ENST00000359726 TRPV2Q9Y5S1 764 aa6.88□□□□□ -1.31
APP-206ENST00000359726 C17orf102A2RUQ5 167 aa6.88□□□□□ -1.31
APP-206ENST00000359726 XRCC3O43542 346 aa6.88□□□□□ -1.31
APP-206ENST00000359726 FMO6PO60774 539 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ANXA2P07355 339 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 ACKR3P25106 362 aa6.88□□□□□ -1.31
APP-206ENST00000359726 LMO1P25800 156 aa6.88□□□□□ -1.31
APP-206ENST00000359726 NDUFS1P28331 727 aa6.88□□□□□ -1.31
APP-206ENST00000359726 AVPR2P30518 371 aa6.88□□□□□ -1.31
APP-206ENST00000359726 BLOC1S1P78537 153 aa6.88□□□□□ -1.31
APP-206ENST00000359726 CAP1Q01518 475 aa6.88□□□□□ -1.31
APP-206ENST00000359726 AGERQ15109 404 aa6.88□□□□□ -1.31
APP-206ENST00000359726 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
APP-206ENST00000359726 MRM1Q6IN84 353 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 TMEM64Q6YI46 380 aa6.88□□□□□ -1.31
APP-206ENST00000359726 DND1Q8IYX4 353 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 LMNTD1Q8N9Z9 388 aa6.88□□□□□ -1.31
APP-206ENST00000359726 DCAF4L2Q8NA75 395 aa6.88□□□□□ -1.31
APP-206ENST00000359726 POMGNT2Q8NAT1 580 aa6.88□□□□□ -1.31
APP-206ENST00000359726 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 CXorf40AQ8TE69 158 aa6.88□□□□□ -1.31
APP-206ENST00000359726 AMDHD1Q96NU7 426 aa6.88□□□□□ -1.31
APP-206ENST00000359726 TWSG1Q9GZX9 223 aa6.88□□□□□ -1.31
APP-206ENST00000359726 AP5M1Q9H0R1 490 aa6.88□□□□□ -1.31
APP-206ENST00000359726 OR52D1Q9H346 318 aa6.88□□□□□ -1.31
APP-206ENST00000359726 NOX4Q9NPH5 578 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
APP-206ENST00000359726 TAS2R10Q9NYW0 307 aa6.88□□□□□ -1.31
APP-206ENST00000359726 PLA2G2EQ9NZK7 142 aa6.88□□□□□ -1.31
APP-206ENST00000359726 PLEKHA6Q9Y2H5 1048 aa6.88□□□□□ -1.31
APP-206ENST00000359726 PRKAB1Q9Y478 270 aa6.88□□□□□ -1.31
APP-206ENST00000359726 C17orf113A0A1B0GUU1 675 aa6.88□□□□□ -1.31
APP-206ENST00000359726 A0A1B0GV90 55 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ARGFXA6NJG6 315 aa6.88□□□□□ -1.31
APP-206ENST00000359726 SLC22A31A6NKX4 558 aa6.88□□□□□ -1.31
APP-206ENST00000359726 CPSF4LA6NMK7 179 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 H7BY64 318 aa6.88□□□□□ -1.31
APP-206ENST00000359726 J3QLW9 94 aa6.88□□□□□ -1.31
APP-206ENST00000359726 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ARL6IP5O75915 188 aa6.88□□□□□ -1.31
APP-206ENST00000359726 GKN3PP0CG01 181 aa6.88□□□□□ -1.31
APP-206ENST00000359726 LYL1P12980 280 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ZNF19P17023 458 aa6.88□□□□□ -1.31
APP-206ENST00000359726 CORO1AP31146 461 aaKnown RBP6.88□□□□□ -1.31
APP-206ENST00000359726 PPT1P50897 306 aa6.88□□□□□ -1.31
APP-206ENST00000359726 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
APP-206ENST00000359726 MEF2AQ02078 507 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 ST3GAL3Q11203 375 aa6.88□□□□□ -1.31
APP-206ENST00000359726 SREBF2Q12772 1141 aa6.88□□□□□ -1.31
APP-206ENST00000359726 TMEM115Q12893 351 aaPredicted RBP6.88□□□□□ -1.31
APP-206ENST00000359726 RAB33AQ14088 237 aa6.88□□□□□ -1.31
APP-206ENST00000359726 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
APP-206ENST00000359726 UNQ6494/PRO21346Q6UXR6 183 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms