RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 EPHX4Q8IUS5 362 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 C10orf53Q8N6V4 93 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 SCAIQ8N9R8 606 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 AQP11Q8NBQ7 271 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 CPNE4Q96A23 557 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF845Q96IR2 970 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 REPIN1Q9BWE0 567 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 OSBPL10Q9BXB5 764 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 MRPL39Q9NYK5 338 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 UBR5O95071 2799 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 NBASA2RRP1 2371 aa11.1□□□□□ -0.63
NIF3L1-201ENST00000359683 PDLIM1O00151 329 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CASQ2O14958 399 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SLC19A2O60779 497 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 WDR1O75083 606 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ADAP00813 363 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 TPOP07202 933 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 GABRA1P14867 456 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ABOP16442 354 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ENPP1P22413 925 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 PTGER4P35408 488 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SLC9A3P48764 834 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 DAPP51397 102 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 P2RY4P51582 365 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 COX10Q12887 443 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 FHL1Q13642 323 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SF3B4Q15427 424 aaKnown RBP eCLIP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ANKDD1AQ495B1 522 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ANKRD34AQ69YU3 496 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 H1FNTQ75WM6 255 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 DOLPP1Q86YN1 238 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 TMEM99Q8N816 258 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CIB1Q99828 191 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 NIPSNAP1Q9BPW8 284 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 NAA11Q9BSU3 229 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 B3GALT5Q9Y2C3 310 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 POLEQ07864 2286 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SPENQ96T58 3664 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CLCA1A8K7I4 914 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF814B7Z6K7 855 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 MS4A18H0YCH9 400 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 M0R082 166 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 PLPP3O14495 311 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 PRRG2O14669 202 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SMAD9O15198 467 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 AKR7A3O95154 331 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SAGP10523 405 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 POU2F1P14859 743 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 KLK2P20151 261 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 NUP107P57740 925 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 PPP2R2BQ00005 443 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZP4Q12836 540 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 PON3Q15166 354 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 MS4A18Q3C1V0 323 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ACSF3Q4G176 576 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 OTUD3Q5T2D3 398 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF585AQ6P3V2 769 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 OAFQ86UD1 273 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CD163Q86VB7 1156 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ADPRHL1Q8NDY3 354 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF417Q8TAU3 575 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 HIST1H2ACQ93077 130 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SDCCAG3Q96C92 435 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZHX1-C8orf76Q96EF9 292 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF587Q96SQ5 575 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 C9orf16Q9BUW7 83 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ASPNQ9BXN1 380 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CALHM2Q9HA72 323 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SMURF2Q9HAU4 748 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CHST11Q9NPF2 352 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 FANCFQ9NPI8 374 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 TAS2R5Q9NYW4 299 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 CLCF1Q9UBD9 225 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 SEC14L4Q9UDX3 406 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 ZNF175Q9Y473 711 aa11.09□□□□□ -0.63
NIF3L1-201ENST00000359683 NAV2Q8IVL1 2488 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 RP1L1Q8IWN7 2480 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 LOC102725191A0A1B0GVB3 256 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 UNC119BA6NIH7 251 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 CD8B2A6NJW9 211 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 AQP7P3A6NL99 342 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 SYNGR4O95473 234 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 GSTM3P21266 225 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 GTF2E2P29084 291 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 UQCRC1P31930 480 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 PMS2P3Q13401 168 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 TRIP10Q15642 601 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 NSUN5P2Q63ZY6 315 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 LPCAT4Q643R3 524 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
NIF3L1-201ENST00000359683 RTL6Q6ICC9 239 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms