RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 RASD2Q96D21 266 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 ATF6BQ99941 703 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 FKRPQ9H9S5 495 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-202ENST00000359031 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 SLC22A11Q9NSA0 550 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 ADAM30Q9UKF2 790 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 ATXN7L1Q9ULK2 861 aaPredicted RBP13.57□□□□□ -0.24
GABPB1-202ENST00000359031 U3KQA8 63 aa13.57□□□□□ -0.24
GABPB1-202ENST00000359031 EXPH5Q8NEV8 1989 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 TEX13CA0A0J9YWL9 993 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 SHISA3A0PJX4 238 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 CDC14CA4D256 554 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 FABP12A6NFH5 140 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 GLCEO94923 617 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 TXNDC12O95881 172 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 PTBP1P26599 531 aaKnown RBP eCLIP13.56□□□□□ -0.242e-8■■■■□ 24.2
GABPB1-202ENST00000359031 SDHAP31040 664 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 AQP2P41181 271 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 NRG3P56975 720 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 OR12D2P58182 307 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 CBFBQ13951 182 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 ALG10Q5BKT4 473 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 METAP1DQ6UB28 335 aaPredicted RBP13.56□□□□□ -0.24
GABPB1-202ENST00000359031 FAM122BQ7Z309 247 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 NANOGNBQ7Z5D8 188 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 MS4A15Q8N5U1 240 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 NAT6Q93015 286 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 MOGAT1Q96PD6 335 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 SEMA4CQ9C0C4 833 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 RNF32Q9H0A6 362 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 WDR70Q9NW82 654 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 C14orf119Q9NWQ9 140 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 ST6GALNAC2Q9UJ37 374 aa13.56□□□□□ -0.24
GABPB1-202ENST00000359031 CACNA1BQ00975 2339 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 SMIM30A4D0T7 59 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 CPED1A4D0V7 1026 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 OR6C70A6NIJ9 312 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 E9PI62 339 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 SIGLEC6O43699 453 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 SERPINA3P01011 423 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 CD1AP06126 327 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 GP1BBP13224 206 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 IL7P13232 177 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 TDGF1P13385 188 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 MYL9P24844 172 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 EVI2BP34910 448 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 GBX2P52951 348 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-202ENST00000359031 CAV3P56539 151 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 EFR3AQ14156 821 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 INSL4Q14641 139 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 SSX6Q7RTT6 188 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 MARCH3Q86UD3 253 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 MISPQ8IVT2 679 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 LSM14AQ8ND56 463 aaKnown RBP13.55□□□□□ -0.24
GABPB1-202ENST00000359031 OR5J2Q8NH18 312 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
GABPB1-202ENST00000359031 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 RTN4RQ9BZR6 473 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 RARRES3Q9UL19 164 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 TBC1D24Q9ULP9 559 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 MOKQ9UQ07 419 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 PCDHGB2Q9Y5G2 931 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 WDR87Q6ZQQ6 2873 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 OTOGLQ3ZCN5 2332 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 UNC13CQ8NB66 2214 aa13.55□□□□□ -0.24
GABPB1-202ENST00000359031 MPDZO75970 2070 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 TRAV36DV7A0A075B6V5 113 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 A0A1W2PQM1 296 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 OGG1O15527 345 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 SLC19A2O60779 497 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 SC5DO75845 299 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 ONECUT2O95948 504 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 HIST1H2ABP04908 130 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 SPNP16150 400 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 CXCR1P25024 350 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 AZGP1P25311 298 aaKnown RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 PYCR1P32322 319 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 NAA10P41227 235 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 P2RX1P51575 399 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 CTXN1P60606 82 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 CCL7P80098 99 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 E2F1Q01094 437 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 LTBQ06643 244 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 RPL18Q07020 188 aaKnown RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 SLC3A1Q07837 685 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 DBPQ10586 325 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 HLA-BQ31612 363 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 NKAIN1Q4KMZ8 207 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 HBMQ6B0K9 141 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 GPR139Q6DWJ6 353 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 DESI1Q6ICB0 168 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 PAMR1Q6UXH9 720 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms