RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.38
VCP-201ENST00000358901 GPLD1P80108 840 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 MALLQ13021 153 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 SAXO2Q658L1 398 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 PRSS45Q7RTY3 260 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 STEAP2Q8NFT2 490 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 OR51Q1Q8NH59 317 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 SPTSSAQ969W0 71 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 ARSGQ96EG1 525 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 FGF22Q9HCT0 170 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 CAMK2AQ9UQM7 478 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 SLC22A7Q9Y694 548 aa12.71□□□□□ -0.38
VCP-201ENST00000358901 ASPDHA6ND91 283 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 DOK2O60496 412 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 NFYAP23511 347 aaPredicted RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 BDKRB2P30411 391 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 OTX2P32243 289 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 FNDC9Q8TBE3 224 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 PAQR8Q8TEZ7 354 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 BCL7CQ8WUZ0 217 aaPredicted RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 LINC01599Q8WXQ3 324 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 MS4A6EQ96DS6 147 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 ZMAT3Q9HA38 289 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 MBNL1Q9NR56 388 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 B4GALT7Q9UBV7 327 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 NTNG1Q9Y2I2 539 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 SMCHD1A6NHR9 2005 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 NUDT21O43809 227 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 CD14P08571 375 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 SBK2P0C263 348 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 MAOAP21397 527 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 SLC14A1Q13336 389 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 IL22RA1Q8N6P7 574 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 EVA1AQ9H8M9 152 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 C1orf196B1AJZ1 125 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 HMGB3O15347 200 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 SULT1C4O75897 302 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 ATP1B1P05026 303 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 PRR35P0CG20 571 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 EIF2S3P41091 472 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
VCP-201ENST00000358901 OR7G2Q8NG99 324 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
VCP-201ENST00000358901 ZC3H12DA2A288 527 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 TNFRSF10AO00220 468 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 P2RX6O15547 441 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 DDOSTP39656 456 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SRP9P49458 86 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 MC2RQ01718 297 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SRYQ05066 204 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 MEX3BQ6ZN04 569 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 OR6F1Q8NGZ6 308 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 PFN4Q8NHR9 129 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 ASB17Q8WXJ9 295 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 HDAC8Q9BY41 377 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 OR10A5Q9H207 317 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SUSD2Q9UGT4 822 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 FAM230AA0A1W2PPH8 454 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TMEM212A6NML5 194 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 H3BNC9 293 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 UBBP0CG47 229 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 UBCP0CG48 685 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 GABRR1P24046 479 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 IRS1P35568 1242 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 FASLGP48023 281 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TGM4P49221 684 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 EPHA5P54756 1037 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 RACK1P63244 317 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 CTF1Q16619 201 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TMEM52BQ4KMG9 183 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 YIPF6Q96EC8 236 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SGCZQ96LD1 299 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 ELF4Q99607 663 aaPredicted RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 SLC6A17Q9H1V8 727 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 TSPAN11A1L157 253 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 PRRT4C9JH25 899 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SLC2A10O95528 541 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 BPNT1O95861 308 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 APEHP13798 732 aaKnown RBP12.69□□□□□ -0.38
VCP-201ENST00000358901 HTR4Q13639 388 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SLC9A3R2Q15599 337 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 ZNF836Q6ZNA1 936 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 MED25Q71SY5 747 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 PLPP6Q8IY26 295 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SPPL3Q8TCT6 385 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 GLYATL2Q8WU03 294 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 RASD2Q96D21 266 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 SFXN2Q96NB2 322 aa12.69□□□□□ -0.38
VCP-201ENST00000358901 LIN7BQ9HAP6 207 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms